RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 CRKP46108 304 aa24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 TNNI2P48788 182 aa24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 FKBP1AP62942 108 aaKnown RBP24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 PSMD2Q13200 908 aa24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 CCDC96Q2M329 555 aa24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 UTP14CQ5TAP6 766 aaKnown RBP24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 ZSCAN29Q8IWY8 852 aaPredicted RBP24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 MXD3Q9BW11 206 aa24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 B4DLN1 442 aa24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 MTIF2P46199 727 aaKnown RBP24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 GABPB1Q06547 395 aaPredicted RBP24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 KIF4BQ2VIQ3 1234 aa24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 STYK1Q6J9G0 422 aa24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 SRGAP1Q7Z6B7 1085 aa24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 CLEC10AQ8IUN9 316 aa24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 KIAA0895Q8NCT3 520 aa24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 RAD54LQ92698 747 aa24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 MKL1Q969V6 931 aa24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 SLF1Q9BQI6 1058 aa24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 PSTPIP2Q9H939 334 aa24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 ZNHIT6Q9NWK9 470 aaKnown RBP24.85■■□□□ 1.57
NKX2-1-201ENST00000354822 MYMKA6NI61 221 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 FIGNQ5HY92 759 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 TTBK2Q6IQ55 1244 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 SNX29Q8TEQ0 813 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 CHP1Q99653 195 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 NOC4LQ9BVI4 516 aaKnown RBP24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 DDX25Q9UHL0 483 aaKnown RBP24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 A0A0U1RQJ8 604 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 PPP1R11O60927 126 aaPredicted RBP24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 TRIM21P19474 475 aaKnown RBP24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 ARHGAP25P42331 645 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 HDLBPQ00341 1268 aaKnown RBP24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 ATP2B2Q01814 1243 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 DMTNQ08495 405 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 MCM6Q14566 821 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 SEPT2Q15019 361 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 MEA1Q16626 185 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 FKBP15Q5T1M5 1219 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 FOXR2Q6PJQ5 311 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 GUF1Q8N442 669 aaKnown RBP24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 ATRIPQ8WXE1 791 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 ERGIC2Q96RQ1 377 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 HAUS4Q9H6D7 363 aa24.84■■□□□ 1.57
NKX2-1-201ENST00000354822 ZRANB2O95218 330 aaKnown RBP eCLIP24.83■■□□□ 1.57
NKX2-1-201ENST00000354822 KRT83P78385 493 aa24.83■■□□□ 1.57
NKX2-1-201ENST00000354822 TMEM119Q4V9L6 283 aa24.83■■□□□ 1.57
NKX2-1-201ENST00000354822 ZNF662Q6ZS27 426 aa24.83■■□□□ 1.57
NKX2-1-201ENST00000354822 SLC35F6Q8N357 371 aa24.83■■□□□ 1.57
NKX2-1-201ENST00000354822 NAPGQ99747 312 aaPredicted RBP24.83■■□□□ 1.57
NKX2-1-201ENST00000354822 TTYH3Q9C0H2 523 aa24.83■■□□□ 1.57
NKX2-1-201ENST00000354822 ZMYND15Q9H091 742 aa24.83■■□□□ 1.57
NKX2-1-201ENST00000354822 ABCB11O95342 1321 aa24.83■■□□□ 1.57
NKX2-1-201ENST00000354822 A0A1W2PQJ5 194 aa24.83■■□□□ 1.56
NKX2-1-201ENST00000354822 H0YIN7 160 aa24.83■■□□□ 1.56
NKX2-1-201ENST00000354822 SLC26A4O43511 780 aa24.83■■□□□ 1.56
NKX2-1-201ENST00000354822 ZBED6P86452 979 aa24.83■■□□□ 1.56
NKX2-1-201ENST00000354822 TEX35Q5T0J7 233 aa24.83■■□□□ 1.56
NKX2-1-201ENST00000354822 DCAF4Q8WV16 495 aa24.83■■□□□ 1.56
NKX2-1-201ENST00000354822 SLC39A2Q9NP94 309 aa24.83■■□□□ 1.56
NKX2-1-201ENST00000354822 PRDM10Q9NQV6 1147 aa24.83■■□□□ 1.56
NKX2-1-201ENST00000354822 NYAP2Q9P242 653 aa24.83■■□□□ 1.56
NKX2-1-201ENST00000354822 GREB1LQ9C091 1923 aaPredicted RBP24.82■■□□□ 1.56
NKX2-1-201ENST00000354822 USP17L10C9JJH3 530 aa24.82■■□□□ 1.56
NKX2-1-201ENST00000354822 MARCH6O60337 910 aa24.82■■□□□ 1.56
NKX2-1-201ENST00000354822 CHMP4BP1P59074 171 aa24.82■■□□□ 1.56
NKX2-1-201ENST00000354822 NFIAQ12857 509 aa24.82■■□□□ 1.56
NKX2-1-201ENST00000354822 KCTD1Q719H9 257 aa24.82■■□□□ 1.56
NKX2-1-201ENST00000354822 SEMA6BQ9H3T3 888 aa24.82■■□□□ 1.56
NKX2-1-201ENST00000354822 KANSL2Q9H9L4 492 aa24.82■■□□□ 1.56
NKX2-1-201ENST00000354822 PI4KBQ9UBF8 816 aa24.82■■□□□ 1.56
NKX2-1-201ENST00000354822 NPM3O75607 178 aaKnown RBP24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 LRRC63Q05C16 580 aa24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 UBE2SQ16763 222 aa24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 STRIP1Q5VSL9 837 aa24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 CCDC170Q8IYT3 715 aa24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 IDI2Q9BXS1 227 aa24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 ATF5Q9Y2D1 282 aaPredicted RBP24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 FHOD1Q9Y613 1164 aa24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 POTEMA6NI47 508 aa24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 CYLC1P35663 651 aaPredicted RBP24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 SLC16A2P36021 539 aa24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 WDR59Q6PJI9 974 aa24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 NT5C3AQ9H0P0 336 aa24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 PCDHA12Q9UN75 941 aa24.81■■□□□ 1.56
NKX2-1-201ENST00000354822 POTEB2H3BUK9 544 aa24.8■■□□□ 1.56
NKX2-1-201ENST00000354822 CDK17Q00537 523 aa24.8■■□□□ 1.56
NKX2-1-201ENST00000354822 MIIPQ5JXC2 388 aa24.8■■□□□ 1.56
NKX2-1-201ENST00000354822 MCTP2Q6DN12 878 aa24.8■■□□□ 1.56
NKX2-1-201ENST00000354822 HAS1Q92839 578 aa24.8■■□□□ 1.56
NKX2-1-201ENST00000354822 KDM3AQ9Y4C1 1321 aa24.8■■□□□ 1.56
NKX2-1-201ENST00000354822 USP11P51784 963 aa24.8■■□□□ 1.56
NKX2-1-201ENST00000354822 WHAMMP3Q1A5X7 153 aa24.8■■□□□ 1.56
NKX2-1-201ENST00000354822 CERKLQ49MI3 558 aaPredicted RBP24.8■■□□□ 1.56
NKX2-1-201ENST00000354822 BMP2KQ9NSY1 1161 aaPredicted RBP24.8■■□□□ 1.56
NKX2-1-201ENST00000354822 MYH4Q9Y623 1939 aa24.79■■□□□ 1.56
NKX2-1-201ENST00000354822 PNMA6AP0CW24 399 aaPredicted RBP24.79■■□□□ 1.56
NKX2-1-201ENST00000354822 HYIQ5T013 277 aa24.79■■□□□ 1.56
NKX2-1-201ENST00000354822 DYMQ7RTS9 669 aa24.79■■□□□ 1.56
NKX2-1-201ENST00000354822 DDX12PQ92771 950 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms