RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 KRT32Q14532 448 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 SEC23AQ15436 765 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 DUSP28Q4G0W2 176 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 C9orf50Q5SZB4 431 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 TMEM63BQ5T3F8 832 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 Q7L0L9 218 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 DEFB123Q8N688 67 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 OR6J1Q8NGC5 347 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 JMJD4Q9H9V9 463 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 KIAA0355O15063 1070 aa13.34□□□□□ -0.27
CDRT1-202ENST00000354433 CABYRO75952 493 aa13.34□□□□□ -0.27
CDRT1-202ENST00000354433 CFBP00751 764 aa13.34□□□□□ -0.27
CDRT1-202ENST00000354433 SHHQ15465 462 aa13.34□□□□□ -0.27
CDRT1-202ENST00000354433 TMEM67Q5HYA8 995 aa13.34□□□□□ -0.27
CDRT1-202ENST00000354433 SCFD2Q8WU76 684 aa13.34□□□□□ -0.27
CDRT1-202ENST00000354433 AMNQ9BXJ7 453 aa13.34□□□□□ -0.27
CDRT1-202ENST00000354433 PPP1R12CQ9BZL4 782 aa13.34□□□□□ -0.27
CDRT1-202ENST00000354433 GPHNQ9NQX3 736 aaPredicted RBP13.34□□□□□ -0.27
CDRT1-202ENST00000354433 Q9Y3F1 56 aa13.34□□□□□ -0.27
CDRT1-202ENST00000354433 TAF6LQ9Y6J9 622 aa13.34□□□□□ -0.27
CDRT1-202ENST00000354433 LCTP09848 1927 aa13.34□□□□□ -0.27
CDRT1-202ENST00000354433 MYL3P08590 195 aa13.33□□□□□ -0.28
CDRT1-202ENST00000354433 CPT1AP50416 773 aa13.33□□□□□ -0.28
CDRT1-202ENST00000354433 BRDTQ58F21 947 aaPredicted RBP13.33□□□□□ -0.28
CDRT1-202ENST00000354433 GPR153Q6NV75 609 aa13.33□□□□□ -0.28
CDRT1-202ENST00000354433 STOX1Q6ZVD7 989 aa13.33□□□□□ -0.28
CDRT1-202ENST00000354433 CATIPQ7Z7H3 387 aa13.33□□□□□ -0.28
CDRT1-202ENST00000354433 FAM126BQ8IXS8 530 aa13.33□□□□□ -0.28
CDRT1-202ENST00000354433 SYTL5Q8TDW5 730 aaPredicted RBP13.33□□□□□ -0.28
CDRT1-202ENST00000354433 INTS4Q96HW7 963 aaKnown RBP13.33□□□□□ -0.28
CDRT1-202ENST00000354433 RNPC3Q96LT9 517 aaKnown RBP13.33□□□□□ -0.28
CDRT1-202ENST00000354433 ALDH8A1Q9H2A2 487 aaPredicted RBP13.33□□□□□ -0.28
CDRT1-202ENST00000354433 MAD2L2Q9UI95 211 aa13.33□□□□□ -0.28
CDRT1-202ENST00000354433 CYP46A1Q9Y6A2 500 aa13.33□□□□□ -0.28
CDRT1-202ENST00000354433 ZBTB5O15062 677 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 TXNP10599 105 aaKnown RBP13.32□□□□□ -0.28
CDRT1-202ENST00000354433 EIF2AK2P19525 551 aaKnown RBP13.32□□□□□ -0.28
CDRT1-202ENST00000354433 EDNRBP24530 442 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 PSMC6P62333 389 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 NKX3-2P78367 333 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 CUL4AQ13619 759 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 ITGA7Q13683 1181 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 TTLL4Q14679 1199 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 ARHGEF16Q5VV41 709 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 RGS22Q8NE09 1264 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 NSUN6Q8TEA1 469 aaKnown RBP13.32□□□□□ -0.28
CDRT1-202ENST00000354433 TBC1D5Q92609 795 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 TMX3Q96JJ7 454 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 RMDN3Q96TC7 470 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 TBX21Q9UL17 535 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 NKRFO15226 690 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDRT1-202ENST00000354433 TIMP1P01033 207 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
CDRT1-202ENST00000354433 CDK7P50613 346 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 GRM4Q14833 912 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 NFKBIBQ15653 356 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 FAM47CQ5HY64 1035 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 SEPT14Q6ZU15 432 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 RUFY3Q7L099 469 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 PIBF1Q8WXW3 757 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 FAM161BQ96MY7 647 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 JAKMIP1Q96N16 626 aaKnown RBP13.32□□□□□ -0.28
CDRT1-202ENST00000354433 TAAR1Q96RJ0 339 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 UPF3BQ9BZI7 483 aaKnown RBP13.32□□□□□ -0.28
CDRT1-202ENST00000354433 POLR3EQ9NVU0 708 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 COL20A1Q9P218 1284 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 PCDHA1Q9Y5I3 950 aa13.32□□□□□ -0.28
CDRT1-202ENST00000354433 PALM3A6NDB9 673 aaPredicted RBP13.31□□□□□ -0.28
CDRT1-202ENST00000354433 ANTXR2P58335 489 aa13.31□□□□□ -0.28
CDRT1-202ENST00000354433 CHMP4BP1P59074 171 aa13.31□□□□□ -0.28
CDRT1-202ENST00000354433 ZNF697Q5TEC3 545 aa13.31□□□□□ -0.28
CDRT1-202ENST00000354433 NFXL1Q6ZNB6 911 aa13.31□□□□□ -0.28
CDRT1-202ENST00000354433 MB21D2Q8IYB1 491 aaPredicted RBP13.31□□□□□ -0.28
CDRT1-202ENST00000354433 TMEM199Q8N511 208 aa13.31□□□□□ -0.28
CDRT1-202ENST00000354433 CTCFLQ8NI51 663 aaPredicted RBP13.31□□□□□ -0.28
CDRT1-202ENST00000354433 COPS5Q92905 334 aa13.31□□□□□ -0.28
CDRT1-202ENST00000354433 PIGSQ96S52 555 aa13.31□□□□□ -0.28
CDRT1-202ENST00000354433 RBM47A0AV96 593 aaKnown RBP13.3□□□□□ -0.28
CDRT1-202ENST00000354433 PRC1O43663 620 aa13.3□□□□□ -0.28
CDRT1-202ENST00000354433 EPHB4P54760 987 aa13.3□□□□□ -0.28
CDRT1-202ENST00000354433 TROAPQ12815 778 aa13.3□□□□□ -0.28
CDRT1-202ENST00000354433 TRAF1Q13077 416 aa13.3□□□□□ -0.28
CDRT1-202ENST00000354433 PPIGQ13427 754 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDRT1-202ENST00000354433 STXBP2Q15833 593 aa13.3□□□□□ -0.28
CDRT1-202ENST00000354433 MFSD5Q6N075 450 aa13.3□□□□□ -0.28
CDRT1-202ENST00000354433 ZSCAN31Q96LW9 406 aaPredicted RBP13.3□□□□□ -0.28
CDRT1-202ENST00000354433 MYL10Q9BUA6 226 aa13.3□□□□□ -0.28
CDRT1-202ENST00000354433 MAF1Q9H063 256 aa13.3□□□□□ -0.28
CDRT1-202ENST00000354433 HIPK3Q9H422 1215 aa13.3□□□□□ -0.28
CDRT1-202ENST00000354433 PDRG1Q9NUG6 133 aa13.3□□□□□ -0.28
CDRT1-202ENST00000354433 CCDC69A6NI79 296 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 B4GALT4O60513 344 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 PPP1R11O60927 126 aaPredicted RBP13.29□□□□□ -0.28
CDRT1-202ENST00000354433 ARIH2O95376 493 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 HMGB1P09429 215 aaKnown RBP13.29□□□□□ -0.28
CDRT1-202ENST00000354433 CSF2RAP15509 400 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 HOXA13P31271 388 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms