RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SMIM23A6NLE4 172 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 CSPG5O95196 566 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 VWA3BQ502W6 1294 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 ANGEL2Q5VTE6 544 aaKnown RBP15.13■□□□□ 0.01
SMC6-201ENST00000351948 SFMBT2Q5VUG0 894 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 PPM1KQ8N3J5 372 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 TMEM39BQ9GZU3 492 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 SLIT1O75093 1534 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 GCFC2P16383 781 aaKnown RBP15.13■□□□□ 0.01
SMC6-201ENST00000351948 RNF34Q969K3 372 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 PRIMPOLQ96LW4 560 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 BHMT2Q9H2M3 363 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 CCND2P30279 289 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 GRIPAP1Q4V328 841 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 MMS19Q96T76 1030 aa15.13■□□□□ 0.01
SMC6-201ENST00000351948 KIAA0754O94854 1291 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 RCSD1Q6JBY9 416 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 NEDD1Q8NHV4 660 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 DCAF4Q8WV16 495 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 PODXL2Q9NZ53 605 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 PNMA2Q9UL42 364 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 POLR1AO95602 1720 aaPredicted RBP15.12■□□□□ 0.01
SMC6-201ENST00000351948 SLFN14P0C7P3 912 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 NR2F2P24468 414 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 CLCN1P35523 988 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 GMPSP49915 693 aaPredicted RBP15.12■□□□□ 0.01
SMC6-201ENST00000351948 POLR2FP61218 127 aaKnown RBP15.12■□□□□ 0.01
SMC6-201ENST00000351948 OSTNP61366 133 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 FAM160B1Q5W0V3 765 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 ABCB11O95342 1321 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 PDXDC2PQ6P474 469 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 NUP58Q9BVL2 599 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 WDR11Q9BZH6 1224 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 LAD1O00515 517 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 BCRP11274 1271 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 SLC8A3P57103 927 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 MTMR2Q13614 643 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 CCDC97Q96F63 343 aaPredicted RBP15.12■□□□□ 0.01
SMC6-201ENST00000351948 GGA3Q9NZ52 723 aa15.12■□□□□ 0.01
SMC6-201ENST00000351948 SRPRBQ9Y5M8 271 aaKnown RBP15.12■□□□□ 0.01
SMC6-201ENST00000351948 SPATA1Q5VX52 437 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 DCUN1D2Q6PH85 259 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 SRBD1Q8N5C6 995 aaKnown RBP15.11■□□□□ 0.01
SMC6-201ENST00000351948 ELP3Q9H9T3 547 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 RNF146Q9NTX7 359 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 ARHGAP23Q9P227 1491 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 PP2D1A8MPX8 630 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 TMOD1P28289 359 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 U2AF1L4Q8WU68 220 aaKnown RBP15.11■□□□□ 0.01
SMC6-201ENST00000351948 CNOT6LQ96LI5 555 aaKnown RBP15.11■□□□□ 0.01
SMC6-201ENST00000351948 IWS1Q96ST2 819 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 TRERF1Q96PN7 1200 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 SLC4A9Q96Q91 983 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 KIF2CQ99661 725 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 hCG_1984214I3L0E3 225 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 YARSP54577 528 aaKnown RBP15.11■□□□□ 0.01
SMC6-201ENST00000351948 GRM4Q14833 912 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 ZNF713Q8N859 430 aaPredicted RBP15.11■□□□□ 0.01
SMC6-201ENST00000351948 TRIM31Q9BZY9 425 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 AGTPBP1Q9UPW5 1226 aa15.11■□□□□ 0.01
SMC6-201ENST00000351948 FSD2A1L4K1 749 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 PLA2G4BP0C869 781 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 RSBN1LQ6PCB5 846 aaPredicted RBP15.1■□□□□ 0.01
SMC6-201ENST00000351948 TMTC1Q8IUR5 882 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 ANKRD13CQ8N6S4 541 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 TDRD7Q8NHU6 1098 aaKnown RBP15.1■□□□□ 0.01
SMC6-201ENST00000351948 AK8Q96MA6 479 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 GSDMAQ96QA5 445 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 ADPGKQ9BRR6 497 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 NRBP1Q9UHY1 535 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 MAN1B1Q9UKM7 699 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 PPP1R7Q15435 360 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 APOBEC3FQ8IUX4 373 aaKnown RBP15.1■□□□□ 0.01
SMC6-201ENST00000351948 CEP112Q8N8E3 955 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 ZNF70Q9UC06 446 aaPredicted RBP15.1■□□□□ 0.01
SMC6-201ENST00000351948 IKBKGQ9Y6K9 419 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 TRIML1Q8N9V2 468 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 GOLGA1Q92805 767 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 ZNF668Q96K58 619 aaPredicted RBP15.1■□□□□ 0.01
SMC6-201ENST00000351948 AP5M1Q9H0R1 490 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 ARFGAP3Q9NP61 516 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 FAM205CA6NFA0 338 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 KIF28PB7ZC32 967 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 NACC1Q96RE7 527 aa15.1■□□□□ 0.01
SMC6-201ENST00000351948 ARHGAP6O43182 974 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 MYZAPP0CAP1 466 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 PPARDQ03181 441 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 IFRD2Q12894 506 aaPredicted RBP15.09■□□□□ 0.01
SMC6-201ENST00000351948 OTUD6BQ8N6M0 293 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 BANK1Q8NDB2 785 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 SECISBP2LQ93073 1101 aaKnown RBP15.09■□□□□ 0.01
SMC6-201ENST00000351948 IFIH1Q9BYX4 1025 aaKnown RBP15.09■□□□□ 0.01
SMC6-201ENST00000351948 KMT5AQ9NQR1 393 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 SAMSN1Q9NSI8 373 aaKnown RBP15.09■□□□□ 0.01
SMC6-201ENST00000351948 COL3A1P02461 1466 aaPredicted RBP15.09■□□□□ 0.01
SMC6-201ENST00000351948 ORC4O43929 436 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 TDP2O95551 362 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 SRGAP2CP0DJJ0 459 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 TUBGCP2Q9BSJ2 902 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms