RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 LRWD1Q9UFC0 647 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 IGKV6D-41A0A0C4DH26 115 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 USP17L15C9J2P7 530 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 USP17L13C9JLJ4 530 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 USP17L11C9JVI0 530 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 USP17L18D6R9N7 530 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 USP17L22D6RA61 530 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 USP17L17D6RBQ6 530 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 USP17L19D6RCP7 530 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 USP17L20D6RJB6 530 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 ZMYND10O75800 440 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 FECHP22830 423 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 SPAG1Q07617 926 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 USP17L24Q0WX57 530 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 BRD3Q15059 726 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 APOBEC3HQ6NTF7 200 aaKnown RBP18.53■□□□□ 0.56
PDAP1-201ENST00000350498 USP17L6PQ6QN14 398 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 P2RX5Q93086 422 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 CNOT6LQ96LI5 555 aaKnown RBP18.53■□□□□ 0.56
PDAP1-201ENST00000350498 SERPINB13Q9UIV8 391 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 L1RE1Q9UN81 338 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 ATP6V0A2Q9Y487 856 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 SRGNP10124 158 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 CCDC96Q2M329 555 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 COL23A1Q86Y22 540 aaPredicted RBP18.53■□□□□ 0.56
PDAP1-201ENST00000350498 ANKRD20A12PQ8NF67 263 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 CAPZA3Q96KX2 299 aa18.53■□□□□ 0.56
PDAP1-201ENST00000350498 EPN1Q9Y6I3 576 aaPredicted RBP18.53■□□□□ 0.56
PDAP1-201ENST00000350498 RCCD1A6NED2 376 aa18.52■□□□□ 0.56
PDAP1-201ENST00000350498 LAD1O00515 517 aa18.52■□□□□ 0.56
PDAP1-201ENST00000350498 NDUFA10O95299 355 aa18.52■□□□□ 0.56
PDAP1-201ENST00000350498 ADCY7P51828 1080 aa18.52■□□□□ 0.56
PDAP1-201ENST00000350498 AMPD2Q01433 879 aa18.52■□□□□ 0.56
PDAP1-201ENST00000350498 CACNB1Q02641 598 aaPredicted RBP18.52■□□□□ 0.56
PDAP1-201ENST00000350498 MSANTD4Q8NCY6 345 aa18.52■□□□□ 0.56
PDAP1-201ENST00000350498 RAB21Q9UL25 225 aa18.52■□□□□ 0.56
PDAP1-201ENST00000350498 FAN1Q9Y2M0 1017 aa18.52■□□□□ 0.56
PDAP1-201ENST00000350498 DUSP10Q9Y6W6 482 aa18.52■□□□□ 0.56
PDAP1-201ENST00000350498 ANKRD31Q8N7Z5 1873 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 KLRG2A4D1S0 409 aaPredicted RBP18.52■□□□□ 0.55
PDAP1-201ENST00000350498 CTAGE15A4D2H0 777 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 LRRIQ3A6PVS8 624 aaPredicted RBP18.52■□□□□ 0.55
PDAP1-201ENST00000350498 EPHB6O15197 1021 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 ATP1A1P05023 1023 aaKnown RBP18.52■□□□□ 0.55
PDAP1-201ENST00000350498 CTAGE8P0CG41 777 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 ZNF543Q08ER8 600 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 RAD51AP2Q09MP3 1159 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 MIIPQ5JXC2 388 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 CTAGE6Q86UF2 777 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 CTAGE4Q8IX94 777 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 CCDC155Q8N6L0 562 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 C7orf25Q9BPX7 421 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 FGFBP2Q9BYJ0 223 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 LCMT1Q9UIC8 334 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 MYO6Q9UM54 1294 aa18.52■□□□□ 0.55
PDAP1-201ENST00000350498 LTBP1Q14766 1721 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 PLEKP08567 350 aaPredicted RBP18.51■□□□□ 0.55
PDAP1-201ENST00000350498 SNHG28P0DPA3 235 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 IDEP14735 1019 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 HERVK_113P62684 666 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 TRPC5Q9UL62 973 aaPredicted RBP18.51■□□□□ 0.55
PDAP1-201ENST00000350498 DDTLA6NHG4 134 aaPredicted RBP18.51■□□□□ 0.55
PDAP1-201ENST00000350498 TTLL1O95922 423 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 CCNE1P24864 410 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 CYP27A1Q02318 531 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 TBC1D8BQ0IIM8 1120 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 SLF2Q8IX21 1173 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 HAS1Q92839 578 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 CCDC51Q96ER9 411 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 AK8Q96MA6 479 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 COA1Q9GZY4 146 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 THAP9Q9H5L6 903 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 TMEM51Q9NW97 253 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 TBC1D7Q9P0N9 293 aa18.51■□□□□ 0.55
PDAP1-201ENST00000350498 LUC7L2Q9Y383 392 aaKnown RBP18.51■□□□□ 0.55
PDAP1-201ENST00000350498 CASP8Q14790 479 aa18.5■□□□□ 0.55
PDAP1-201ENST00000350498 ZSCAN26Q16670 478 aa18.5■□□□□ 0.55
PDAP1-201ENST00000350498 GSPT2Q8IYD1 628 aaKnown RBP18.5■□□□□ 0.55
PDAP1-201ENST00000350498 PCMTD1Q96MG8 357 aaPredicted RBP18.5■□□□□ 0.55
PDAP1-201ENST00000350498 MMS19Q96T76 1030 aa18.5■□□□□ 0.55
PDAP1-201ENST00000350498 KANSL2Q9H9L4 492 aa18.5■□□□□ 0.55
PDAP1-201ENST00000350498 ZNF185O15231 689 aa18.5■□□□□ 0.55
PDAP1-201ENST00000350498 MTIF2P46199 727 aaKnown RBP18.5■□□□□ 0.55
PDAP1-201ENST00000350498 STIM1Q13586 685 aa18.5■□□□□ 0.55
PDAP1-201ENST00000350498 FOXR1Q6PIV2 292 aa18.5■□□□□ 0.55
PDAP1-201ENST00000350498 OR8K1Q8NGG5 319 aa18.5■□□□□ 0.55
PDAP1-201ENST00000350498 SNX29Q8TEQ0 813 aa18.5■□□□□ 0.55
PDAP1-201ENST00000350498 P2RX7Q99572 595 aaKnown RBP18.5■□□□□ 0.55
PDAP1-201ENST00000350498 LACRTQ9GZZ8 138 aa18.5■□□□□ 0.55
PDAP1-201ENST00000350498 MAGEC2Q9UBF1 373 aaPredicted RBP18.5■□□□□ 0.55
PDAP1-201ENST00000350498 FOCADQ5VW36 1801 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 NPHP3-ACAD11A0A0J9YXS1 232 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 EEF1GP26641 437 aaKnown RBP18.49■□□□□ 0.55
PDAP1-201ENST00000350498 HDXQ7Z353 690 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 ZNF622Q969S3 477 aaKnown RBP eCLIP18.49■□□□□ 0.554e-9■■□□□ 12.4
PDAP1-201ENST00000350498 CALML4Q96GE6 196 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 POLD4Q9HCU8 107 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 MYH7BA7E2Y1 1941 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 G3V3G9 751 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 TRIM21P19474 475 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms