RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 EAPPQ56P03 285 aaPredicted RBP13.44□□□□□ -0.26
SMAD9-201ENST00000350148 SARM1Q6SZW1 724 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 PPP4R3CPQ6ZMV5 832 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 HOXC10Q9NYD6 342 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 ESYT2A0FGR8 921 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 TESPA1A2RU30 521 aaPredicted RBP13.44□□□□□ -0.26
SMAD9-201ENST00000350148 AKR1B1P15121 316 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 SLC44A5Q8NCS7 719 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 LPAR1Q92633 364 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 PAGE5Q96GU1 130 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 ZDHHC15Q96MV8 337 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 RIC1Q4ADV7 1423 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 F5H6K3 240 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 EXOC3O60645 756 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 ATP2C1P98194 919 aaPredicted RBP13.44□□□□□ -0.26
SMAD9-201ENST00000350148 KLRC3Q07444 240 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 PPP2R5AQ15172 486 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 CLUL1Q15846 466 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 PGBD1Q96JS3 809 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 THAP9Q9H5L6 903 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 PNMA3Q9UL41 463 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 ZBTB7AO95365 584 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 BCRP11274 1271 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 KRT9P35527 623 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 CHMP4BP1P59074 171 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 ZNF543Q08ER8 600 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 KCTD2Q14681 263 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 SPICE1Q8N0Z3 855 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 KIAA1024Q9UPX6 916 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 P2RX5Q93086 422 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 MAPK8IP1Q9UQF2 711 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 DDX39AO00148 427 aaKnown RBP13.43□□□□□ -0.26
SMAD9-201ENST00000350148 PRKG1Q13976 671 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 OR8K1Q8NGG5 319 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 MRIQ9BWK5 157 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 SLIT2O94813 1529 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 EZH2Q15910 746 aaKnown RBP13.43□□□□□ -0.26
SMAD9-201ENST00000350148 SRBD1Q8N5C6 995 aaKnown RBP13.43□□□□□ -0.26
SMAD9-201ENST00000350148 DAGLBQ8NCG7 672 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 CCDC102AQ96A19 550 aa13.43□□□□□ -0.26
SMAD9-201ENST00000350148 USP17L10C9JJH3 530 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 FAM178BQ8IXR5 827 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 STAMQ92783 540 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 GOLGA1Q92805 767 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 FANCLQ9NW38 375 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 PVALEFA0A1B0GWK0 134 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 NMT2O60551 498 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 XRCC5P13010 732 aaKnown RBP13.42□□□□□ -0.26
SMAD9-201ENST00000350148 FTOQ9C0B1 505 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMAD9-201ENST00000350148 RASSF4Q9H2L5 321 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 MLXIPQ9HAP2 919 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 ZNF70Q9UC06 446 aaPredicted RBP13.42□□□□□ -0.26
SMAD9-201ENST00000350148 POLLQ9UGP5 575 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 ARMCX3Q9UH62 379 aaPredicted RBP13.42□□□□□ -0.26
SMAD9-201ENST00000350148 PCDHA6Q9UN73 950 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 PCDHA8Q9Y5H6 950 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 CCNE1P24864 410 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 TTC31Q49AM3 519 aaPredicted RBP13.42□□□□□ -0.26
SMAD9-201ENST00000350148 TRMT44Q8IYL2 757 aaKnown RBP13.42□□□□□ -0.26
SMAD9-201ENST00000350148 PRPF38AQ8NAV1 312 aaKnown RBP13.42□□□□□ -0.26
SMAD9-201ENST00000350148 ALS2Q96Q42 1657 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 ATRNO75882 1429 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 PHLPP2Q6ZVD8 1323 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 GBP2P32456 591 aaPredicted RBP13.42□□□□□ -0.26
SMAD9-201ENST00000350148 JAK3P52333 1124 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 SP4Q02446 784 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 MIS18BP1Q6P0N0 1132 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 ADGRF4Q8IZF3 695 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 FAM81BQ96LP2 452 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 ZNF408Q9H9D4 720 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 COPB1P53618 953 aaKnown RBP13.42□□□□□ -0.26
SMAD9-201ENST00000350148 YWHAEP62258 255 aaKnown RBP13.42□□□□□ -0.26
SMAD9-201ENST00000350148 LRRC63Q05C16 580 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 RAPGEF1Q13905 1077 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 TKFCQ3LXA3 575 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 CCDC122Q5T0U0 273 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 SFMBT2Q5VUG0 894 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 ZBTB8OSQ8IWT0 167 aa13.42□□□□□ -0.26
SMAD9-201ENST00000350148 XKR9Q5GH70 373 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 GIMAP8Q8ND71 665 aaPredicted RBP13.41□□□□□ -0.26
SMAD9-201ENST00000350148 RTFDC1Q9BY42 306 aaPredicted RBP13.41□□□□□ -0.26
SMAD9-201ENST00000350148 MTFR1LQ9H019 292 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.41□□□□□ -0.266e-9■■■■■ 134.6
SMAD9-201ENST00000350148 PUF60Q9UHX1 559 aaKnown RBP13.41□□□□□ -0.26
SMAD9-201ENST00000350148 PDIA5Q14554 519 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 LONRF3Q496Y0 759 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 DEPTORQ8TB45 409 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 DRC1Q96MC2 740 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 FERMT1Q9BQL6 677 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 TMEM206Q9H813 350 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 BCCIPQ9P287 314 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMAD9-201ENST00000350148 HPS5Q9UPZ3 1129 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
SMAD9-201ENST00000350148 WDR46O15213 610 aaKnown RBP13.41□□□□□ -0.26
SMAD9-201ENST00000350148 TNFAIP3P21580 790 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 TBC1D22BQ9NU19 505 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 RASAL2Q9UJF2 1139 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 SNX16P57768 344 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms