RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ANO3Q9BYT9 981 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 CD248Q9HCU0 757 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 TLR7Q9NYK1 1049 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 PCDHB13Q9Y5F0 798 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 MAP3K15Q6ZN16 1313 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 MLH3Q9UHC1 1453 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 HGSO14964 777 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 MTX1Q13505 466 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 SGSM3Q96HU1 749 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 FAM81BQ96LP2 452 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 BEGAINQ9BUH8 593 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 NACA2Q9H009 215 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 PSTPIP2Q9H939 334 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 FAM207AQ9NSI2 230 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 PALD1Q9ULE6 856 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 THRAP3Q9Y2W1 955 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 MAFGO15525 162 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 TNNI1P19237 187 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 ERCC5P28715 1186 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 ZC3H18Q86VM9 953 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 MLXIPQ9HAP2 919 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 TNKSO95271 1327 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 SH3BP5O60239 455 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 MECOMQ03112 1051 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 SNRNP27Q8WVK2 155 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 SH3GL2Q99962 352 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 NLRC4Q9NPP4 1024 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 ABCC4O15439 1325 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 PRPF6O94906 941 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 PCCAP05165 728 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 PAX3P23760 479 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 CTCFP49711 727 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 PACS2Q86VP3 889 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 GPBP1Q86WP2 473 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 NUDCD3Q8IVD9 361 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 SPICE1Q8N0Z3 855 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 PNMA1Q8ND90 353 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 KLHL29Q96CT2 875 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 GDAP1L1Q96MZ0 367 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 MTRQ99707 1265 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 PAPOLBQ9NRJ5 636 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 ZNF148Q9UQR1 794 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 TRPC6Q9Y210 931 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 M0QZ92 97 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 WDR46O15213 610 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 KRT7P08729 469 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 LMNB2Q03252 620 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 MLKLQ8NB16 471 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 SSH3Q8TE77 659 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 GIMAP4Q9NUV9 329 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 TTLL3Q9Y4R7 772 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 ADGRL2O95490 1459 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 CASP8Q14790 479 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 DCUN1D2Q6PH85 259 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 NCAPG2Q86XI2 1143 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 CCDC26Q8TAB7 109 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 SEC31BQ9NQW1 1179 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 LSM1O15116 133 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 FGAP02671 866 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 CYLC2Q14093 348 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 CCDC14Q49A88 953 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 CHURC1Q8WUH1 139 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 DYDC2Q96IM9 177 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 HAUS7Q99871 368 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 TXLNGQ9NUQ3 528 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 MCM8Q9UJA3 840 aa12.07□□□□□ -0.48
SMARCE1-202ENST00000348513 MGEA5O60502 916 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 SUPT3HO75486 399 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 GAS8O95995 478 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 SNX16P57768 344 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 TRIM14Q14142 442 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 KLHL7Q8IXQ5 586 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 ZNF804BA4D1E1 1349 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 PPEF1O14829 653 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 SUN1O94901 812 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 TYW1BQ6NUM6 668 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 BLIDQ8IZY5 108 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 SLF1Q9BQI6 1058 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 PTPROQ16827 1216 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 GEN1Q17RS7 908 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 SLC9C1Q4G0N8 1177 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 FAM196AQ6ZSG2 479 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 TBC1D1Q86TI0 1168 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 TEKT4Q8WW24 435 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 MMADHCQ9H3L0 296 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 KDM4CQ9H3R0 1056 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 AS3MTQ9HBK9 375 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 ARHGEF9O43307 516 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 ESRRGP62508 458 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 UBXN2AP68543 259 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 KLHL30Q0D2K2 578 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 NR1H4Q96RI1 486 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 RRAGAQ7L523 313 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 ATP11CQ8NB49 1132 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms