RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 IGSF22Q8N9C0 903 aa21.09■□□□□ 0.97
PTN-201ENST00000348225 HOXC10Q9NYD6 342 aa21.09■□□□□ 0.97
PTN-201ENST00000348225 MAP3K20Q9NYL2 800 aaKnown RBP21.09■□□□□ 0.97
PTN-201ENST00000348225 LOC285556D6RIA3 1793 aa21.09■□□□□ 0.97
PTN-201ENST00000348225 CXCL11O14625 94 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 CIITAP33076 1130 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 HSD17B4P51659 736 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 MDM2Q00987 491 aaPredicted RBP21.08■□□□□ 0.97
PTN-201ENST00000348225 GHRHRQ02643 423 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 PDIA5Q14554 519 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 E2F4Q16254 413 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 Q4G0T1 1027 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 SLFN12Q8IYM2 578 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 OTUD5Q96G74 571 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 NAT10Q9H0A0 1025 aaKnown RBP21.08■□□□□ 0.97
PTN-201ENST00000348225 DNAJC25Q9H1X3 360 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 DISC1Q9NRI5 854 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 ADAMTS5Q9UNA0 930 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 RABGAP1Q9Y3P9 1069 aa21.08■□□□□ 0.97
PTN-201ENST00000348225 ZNF76P36508 570 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 STAT6P42226 847 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 NLRP12P59046 1061 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 PPIL2Q13356 520 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 CABP7Q86V35 215 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 PROCA1Q8NCQ7 364 aaPredicted RBP21.07■□□□□ 0.96
PTN-201ENST00000348225 CLEC4DQ8WXI8 215 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 TBC1D5Q92609 795 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 LRWD1Q9UFC0 647 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 TBX3O15119 743 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 SMC2O95347 1197 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 ZNF165P49910 485 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 KARSQ15046 597 aaKnown RBP21.07■□□□□ 0.96
PTN-201ENST00000348225 RRAGBQ5VZM2 374 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 MOB2Q70IA6 237 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 CNKSR2Q8WXI2 1034 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 CLMNQ96JQ2 1002 aa21.07■□□□□ 0.96
PTN-201ENST00000348225 TTC12Q9H892 705 aaPredicted RBP21.07■□□□□ 0.96
PTN-201ENST00000348225 COL11A1P12107 1806 aaPredicted RBP21.07■□□□□ 0.96
PTN-201ENST00000348225 A0A0G2JLL6 359 aaPredicted RBP21.06■□□□□ 0.96
PTN-201ENST00000348225 UNCXA6NJT0 531 aa21.06■□□□□ 0.96
PTN-201ENST00000348225 PP2D1A8MPX8 630 aa21.06■□□□□ 0.96
PTN-201ENST00000348225 CDC25AP30304 524 aa21.06■□□□□ 0.96
PTN-201ENST00000348225 SH3RF1Q7Z6J0 888 aa21.06■□□□□ 0.96
PTN-201ENST00000348225 PRRT2Q7Z6L0 340 aaPredicted RBP21.06■□□□□ 0.96
PTN-201ENST00000348225 REPS2Q8NFH8 660 aa21.06■□□□□ 0.96
PTN-201ENST00000348225 HAS1Q92839 578 aa21.06■□□□□ 0.96
PTN-201ENST00000348225 SMARCE1Q969G3 411 aa21.06■□□□□ 0.96
PTN-201ENST00000348225 CALML4Q96GE6 196 aa21.06■□□□□ 0.96
PTN-201ENST00000348225 PAGE5Q96GU1 130 aa21.06■□□□□ 0.96
PTN-201ENST00000348225 CUEDC2Q9H467 287 aa21.06■□□□□ 0.96
PTN-201ENST00000348225 KCNMB3Q9NPA1 279 aa21.06■□□□□ 0.96
PTN-201ENST00000348225 NFIBO00712 420 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 IRF6O14896 467 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 ATP2A1O14983 1001 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 FOXN1O15353 648 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 PRR16Q569H4 304 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 MAP1SQ66K74 1059 aaPredicted RBP21.05■□□□□ 0.96
PTN-201ENST00000348225 PDXDC2PQ6P474 469 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 TRERF1Q96PN7 1200 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 MAGEF1Q9HAY2 307 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 CBX8Q9HC52 389 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 HOMER2Q9NSB8 354 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 PCDHA12Q9UN75 941 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 KCNH4Q9UQ05 1017 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 PCDHA5Q9Y5H7 936 aa21.05■□□□□ 0.96
PTN-201ENST00000348225 DCAF8L1A6NGE4 600 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 BIN1O00499 593 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 TKFCQ3LXA3 575 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 NT5DC1Q5TFE4 455 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 GADL1Q6ZQY3 521 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 TRIML1Q8N9V2 468 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 WNK4Q96J92 1243 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 FAM20AQ96MK3 541 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 TEX13BQ9BXU2 312 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 RRAGCQ9HB90 399 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 RNF146Q9NTX7 359 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 SPDYE16A6NNV3 312 aaPredicted RBP21.04■□□□□ 0.96
PTN-201ENST00000348225 PRR29P0C7W0 189 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 POTEIP0CG38 1075 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 POTEJP0CG39 1038 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 AFMP43652 599 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 MUM1L1Q5H9M0 696 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 LDLRAD1Q5T700 205 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 KRT79Q5XKE5 535 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 SNRNP48Q6IEG0 339 aaKnown RBP21.04■□□□□ 0.96
PTN-201ENST00000348225 C11orf57Q6ZUT1 292 aaPredicted RBP21.04■□□□□ 0.96
PTN-201ENST00000348225 GRAMD1CQ8IYS0 662 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 OPTNQ96CV9 577 aa21.04■□□□□ 0.96
PTN-201ENST00000348225 ZNF214Q9UL59 606 aaPredicted RBP21.04■□□□□ 0.96
PTN-201ENST00000348225 FAM86B1E9PN63 330 aa21.03■□□□□ 0.96
PTN-201ENST00000348225 FAM86B2P0C5J1 330 aa21.03■□□□□ 0.96
PTN-201ENST00000348225 HOXA7P31268 230 aaPredicted RBP21.03■□□□□ 0.96
PTN-201ENST00000348225 DPCR1Q3MIW9 517 aa21.03■□□□□ 0.96
PTN-201ENST00000348225 TREML2Q5T2D2 321 aa21.03■□□□□ 0.96
PTN-201ENST00000348225 ETNPPLQ8TBG4 499 aa21.03■□□□□ 0.96
PTN-201ENST00000348225 CDK5RAP3Q96JB5 506 aa21.03■□□□□ 0.96
PTN-201ENST00000348225 BPIFA3Q9BQP9 254 aa21.03■□□□□ 0.96
PTN-201ENST00000348225 MAF1Q9H063 256 aa21.03■□□□□ 0.96
PTN-201ENST00000348225 SLC26A4O43511 780 aa21.02■□□□□ 0.96
PTN-201ENST00000348225 GTPBP6O43824 516 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms