RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 ZNF213O14771 459 aa17.89■□□□□ 0.45
MBD1-204ENST00000347968 POLE2P56282 527 aa17.89■□□□□ 0.45
MBD1-204ENST00000347968 UAP1Q16222 522 aaPredicted RBP17.89■□□□□ 0.45
MBD1-204ENST00000347968 CCDC197Q8NCU1 140 aa17.89■□□□□ 0.45
MBD1-204ENST00000347968 PUS7LQ9H0K6 701 aaKnown RBP17.89■□□□□ 0.45
MBD1-204ENST00000347968 SHBGP04278 402 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 FESP07332 822 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 IFNAR2P48551 515 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 TRIM14Q14142 442 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 SAFBQ15424 915 aaKnown RBP eCLIP17.88■□□□□ 0.45
MBD1-204ENST00000347968 ARFGAP2Q8N6H7 521 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 ZKSCAN3Q9BRR0 538 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 STRN4Q9NRL3 753 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 ANGEL1Q9UNK9 670 aaKnown RBP17.88■□□□□ 0.45
MBD1-204ENST00000347968 ZBTB43O43298 467 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 TATP17735 454 aaPredicted RBP17.88■□□□□ 0.45
MBD1-204ENST00000347968 PPP2R2AP63151 447 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 PDCD2Q16342 344 aaPredicted RBP17.88■□□□□ 0.45
MBD1-204ENST00000347968 EARS2Q5JPH6 523 aaKnown RBP17.88■□□□□ 0.45
MBD1-204ENST00000347968 KANK3Q6NY19 840 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 KLHL23Q8NBE8 558 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 TEKT4Q8WW24 435 aa17.88■□□□□ 0.45
MBD1-204ENST00000347968 TTC36A6NLP5 189 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 IGF2BP3O00425 579 aaKnown RBP eCLIP17.87■□□□□ 0.45
MBD1-204ENST00000347968 RAD51CO43502 376 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 AHCYL1O43865 530 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 PRCPP42785 496 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 TBC1D10CQ8IV04 446 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 FAM210AQ96ND0 272 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 SELENOSQ9BQE4 189 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 TLR10Q9BXR5 811 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 CAPN11Q9UMQ6 739 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 SRPRBQ9Y5M8 271 aaKnown RBP17.87■□□□□ 0.45
MBD1-204ENST00000347968 MEGF6O75095 1541 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 NUTM2BA6NNL0 878 aaPredicted RBP17.87■□□□□ 0.45
MBD1-204ENST00000347968 NUTM2EB1AL46 878 aaPredicted RBP17.87■□□□□ 0.45
MBD1-204ENST00000347968 C2CD5Q86YS7 1000 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 LBHD1Q9BQE6 289 aaPredicted RBP17.87■□□□□ 0.45
MBD1-204ENST00000347968 GDF3Q9NR23 364 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 C2CD2Q9Y426 696 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 OVOS2A0A0G2JMS6 1433 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 XDHP47989 1333 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 UBOX5O94941 541 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 ZNF174Q15697 407 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 KRT71Q3SY84 523 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 MTMR8Q96EF0 704 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 ZNF594Q96JF6 807 aaPredicted RBP17.87■□□□□ 0.45
MBD1-204ENST00000347968 NEUROG2Q9H2A3 272 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 KDM4CQ9H3R0 1056 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 FAM217BQ9NTX9 383 aaPredicted RBP17.87■□□□□ 0.45
MBD1-204ENST00000347968 ZMYND8Q9ULU4 1186 aaPredicted RBP17.87■□□□□ 0.45
MBD1-204ENST00000347968 CEP131Q9UPN4 1083 aa17.87■□□□□ 0.45
MBD1-204ENST00000347968 PHRF1Q9P1Y6 1649 aaKnown RBP17.86■□□□□ 0.45
MBD1-204ENST00000347968 RASSF10A6NK89 507 aa17.86■□□□□ 0.45
MBD1-204ENST00000347968 SH2B2O14492 632 aaPredicted RBP17.86■□□□□ 0.45
MBD1-204ENST00000347968 KRT16P08779 473 aa17.86■□□□□ 0.45
MBD1-204ENST00000347968 PLIN2Q99541 437 aa17.86■□□□□ 0.45
MBD1-204ENST00000347968 SH2D4AQ9H788 454 aa17.86■□□□□ 0.45
MBD1-204ENST00000347968 PNMA2Q9UL42 364 aa17.86■□□□□ 0.45
MBD1-204ENST00000347968 PCDHA13Q9Y5I0 950 aa17.86■□□□□ 0.45
MBD1-204ENST00000347968 LRRC10BA6NIK2 292 aa17.86■□□□□ 0.45
MBD1-204ENST00000347968 RASSF7Q02833 373 aa17.86■□□□□ 0.45
MBD1-204ENST00000347968 RNASELQ05823 741 aaKnown RBP17.86■□□□□ 0.45
MBD1-204ENST00000347968 SSRP1Q08945 709 aaKnown RBP17.86■□□□□ 0.45
MBD1-204ENST00000347968 NTRK3Q16288 839 aa17.86■□□□□ 0.45
MBD1-204ENST00000347968 FAM170AA1A519 330 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 SEMA3EO15041 775 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 RFX5P48382 616 aaPredicted RBP17.85■□□□□ 0.45
MBD1-204ENST00000347968 ENOX2Q16206 610 aaKnown RBP17.85■□□□□ 0.45
MBD1-204ENST00000347968 RNF220Q5VTB9 566 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 HHATQ5VTY9 493 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 PURBQ96QR8 312 aaKnown RBP17.85■□□□□ 0.45
MBD1-204ENST00000347968 MTRQ99707 1265 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 A6NHS1 94 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 NEURL1BA8MQ27 555 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 AKR1B10O60218 316 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 CDKL5O76039 1030 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 RNF8O76064 485 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 TCP1P17987 556 aaKnown RBP17.85■□□□□ 0.45
MBD1-204ENST00000347968 GCKRQ14397 625 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 TOM1L2Q6ZVM7 507 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 LONP2Q86WA8 852 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 GOLPH3Q9H4A6 298 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 FBXL5Q9UKA1 691 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 N4BP2Q86UW6 1770 aaPredicted RBP17.85■□□□□ 0.45
MBD1-204ENST00000347968 CACNA1FO60840 1977 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 LGALS16A8MUM7 142 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 USO1O60763 962 aaKnown RBP17.85■□□□□ 0.45
MBD1-204ENST00000347968 MMP1P03956 469 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 VIMP08670 466 aaKnown RBP17.85■□□□□ 0.45
MBD1-204ENST00000347968 ERVK-9P63128 1117 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 SPATA21Q7Z572 469 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 LRRC34Q8IZ02 419 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 CHMP6Q96FZ7 201 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 GSDMAQ96QA5 445 aa17.85■□□□□ 0.45
MBD1-204ENST00000347968 TLDC2A0PJX2 215 aa17.84■□□□□ 0.45
MBD1-204ENST00000347968 EIF4A3P38919 411 aaKnown RBP17.84■□□□□ 0.45
MBD1-204ENST00000347968 CRELD2Q6UXH1 353 aaPredicted RBP17.84■□□□□ 0.45
MBD1-204ENST00000347968 CNBD1Q8NA66 436 aa17.84■□□□□ 0.45
MBD1-204ENST00000347968 TRIM47Q96LD4 638 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms