RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 POTEMA6NI47 508 aa16.21■□□□□ 0.19
ARHGEF1-202ENST00000347545 PDE2AO00408 941 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF1-202ENST00000347545 FXR2P51116 673 aaKnown RBP eCLIP16.21■□□□□ 0.191e-6■■■□□ 18.4
ARHGEF1-202ENST00000347545 USP14P54578 494 aa16.21■□□□□ 0.19
ARHGEF1-202ENST00000347545 CASP8Q14790 479 aa16.21■□□□□ 0.19
ARHGEF1-202ENST00000347545 ECM1Q16610 540 aa16.21■□□□□ 0.19
ARHGEF1-202ENST00000347545 FIGNQ5HY92 759 aa16.21■□□□□ 0.19
ARHGEF1-202ENST00000347545 MFSD14BQ5SR56 506 aa16.21■□□□□ 0.19
ARHGEF1-202ENST00000347545 SOGA3Q5TF21 947 aa16.21■□□□□ 0.19
ARHGEF1-202ENST00000347545 KRT26Q7Z3Y9 468 aa16.21■□□□□ 0.19
ARHGEF1-202ENST00000347545 LRRC47Q8N1G4 583 aaKnown RBP16.21■□□□□ 0.19
ARHGEF1-202ENST00000347545 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF1-202ENST00000347545 ZNF185O15231 689 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 PPP1R11O60927 126 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 KRT83P78385 493 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 CALCRLQ16602 461 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 CNNM4Q6P4Q7 775 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 KIAA1328Q86T90 577 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 FAM114A1Q8IWE2 563 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 CCDC170Q8IYT3 715 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 NGLY1Q96IV0 654 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 LRRC4BQ9NT99 713 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 SAR1BQ9Y6B6 198 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 IGKV6D-41A0A0C4DH26 115 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 CDK17Q00537 523 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 EHHADHQ08426 723 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 DYMQ7RTS9 669 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 CAPZA3Q96KX2 299 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 MTMR4Q9NYA4 1195 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 DAGLAQ9Y4D2 1042 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 ERLIN1O75477 346 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 SNHG28P0DPA3 235 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 AKR1B1P15121 316 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 CYLC1P35663 651 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 GABPAQ06546 454 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 ORC2Q13416 577 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 TSR1Q2NL82 804 aaKnown RBP16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 UNC13DQ70J99 1090 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 SMCR8Q8TEV9 937 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 RPGRQ92834 1020 aaKnown RBP16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 CALML4Q96GE6 196 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 ARHGAP20Q9P2F6 1191 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 LRWD1Q9UFC0 647 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 GGA1Q9UJY5 639 aa16.2■□□□□ 0.18
ARHGEF1-202ENST00000347545 EP400Q96L91 3159 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 ATP2B4P23634 1241 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 HNRNPH3P31942 346 aaKnown RBP16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 EIF6P56537 245 aaKnown RBP16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 SV2BQ7L1I2 683 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 CERS3Q8IU89 383 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 GJA10Q969M2 543 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 CCDC47Q96A33 483 aaKnown RBP16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 AMPD3Q01432 767 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 TMEM119Q4V9L6 283 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 VWA3BQ502W6 1294 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 LRRC55Q6ZSA7 311 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 GPIHBP1Q8IV16 184 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 TBC1D16Q8TBP0 767 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 LARP4BQ92615 738 aaKnown RBP16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 RAD54LQ92698 747 aa16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 PCMTD1Q96MG8 357 aaPredicted RBP16.19■□□□□ 0.18
ARHGEF1-202ENST00000347545 SIPA1L1O43166 1804 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 ATAD5Q96QE3 1844 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 KRT86O43790 486 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 CAPN2P17655 700 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 ADCY7P51828 1080 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 DDX4Q9NQI0 724 aaKnown RBP16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 PLCG2P16885 1265 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 PPP1R2P41236 205 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 VAV2P52735 878 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 UBE2SQ16763 222 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 EXOC4Q96A65 974 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 NDST4Q9H3R1 872 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 STK17AQ9UEE5 414 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 ZC3H4Q9UPT8 1303 aaKnown RBP16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 ANKRD31Q8N7Z5 1873 aa16.18■□□□□ 0.18
ARHGEF1-202ENST00000347545 MACROD2A1Z1Q3 448 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 CLK2P49760 499 aaKnown RBP16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 GPCPD1Q9NPB8 672 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 ZNHIT6Q9NWK9 470 aaKnown RBP16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 VPS18Q9P253 973 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 PLAGL2Q9UPG8 496 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 FAN1Q9Y2M0 1017 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 CAPN6Q9Y6Q1 641 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 PVALEFA0A1B0GWK0 134 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 DPP8Q6V1X1 898 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 HAS1Q92839 578 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 JMJD4Q9H9V9 463 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 FAM207AQ9NSI2 230 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 PSD3Q9NYI0 1048 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 MYBL2P10244 700 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 GYS1P13807 737 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 ERCC3P19447 782 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 PICALMQ13492 652 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 LRRC41Q15345 812 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 TTBK2Q6IQ55 1244 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 TXLNBQ8N3L3 684 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 GUF1Q8N442 669 aaKnown RBP16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 BAP1Q92560 729 aa16.17■□□□□ 0.18
ARHGEF1-202ENST00000347545 MLXIPQ9HAP2 919 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms