RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 BCRP11274 1271 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 DR1Q01658 176 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 MKRN3Q13064 507 aaKnown RBP14.78□□□□□ -0.04
TRIO-202ENST00000344204 IGF2BP3O00425 579 aaKnown RBP eCLIP14.78□□□□□ -0.04
TRIO-202ENST00000344204 PTH1RQ03431 593 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 KRT14P02533 472 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 ENOX1Q8TC92 643 aaKnown RBP14.78□□□□□ -0.04
TRIO-202ENST00000344204 LRWD1Q9UFC0 647 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 KIFC3Q9BVG8 833 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 BIN2Q9UBW5 565 aaPredicted RBP14.78□□□□□ -0.04
TRIO-202ENST00000344204 E4F1Q66K89 784 aaPredicted RBP14.78□□□□□ -0.04
TRIO-202ENST00000344204 BZW1Q7L1Q6 419 aaKnown RBP14.78□□□□□ -0.04
TRIO-202ENST00000344204 CCDC15Q0P6D6 951 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 DACT3Q96B18 629 aaPredicted RBP14.78□□□□□ -0.04
TRIO-202ENST00000344204 ANO9A1A5B4 782 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 TULP2O00295 520 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 C3orf20Q8ND61 904 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 MYH14Q7Z406 1995 aaKnown RBP14.78□□□□□ -0.04
TRIO-202ENST00000344204 EXOC1LA0A1B0GW35 172 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 CCNT1O60563 726 aaKnown RBP14.78□□□□□ -0.04
TRIO-202ENST00000344204 CNGA3Q16281 694 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 TXNDC2Q86VQ3 553 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 RWDD2AQ9UIY3 292 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 PTPN22Q9Y2R2 807 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 HSPA6P17066 643 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 SNX16P57768 344 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 SLC39A14Q15043 492 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 TUBGCP2Q9BSJ2 902 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 CARD9Q9H257 536 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 LRRIQ1Q96JM4 1722 aa14.78□□□□□ -0.04
TRIO-202ENST00000344204 TCP11X1B4DZS4 312 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 ACSL3O95573 720 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 MMEL1Q495T6 779 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 PIK3AP1Q6ZUJ8 805 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 USHBP1Q8N6Y0 703 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 TRPC6Q9Y210 931 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 ARL2BPQ9Y2Y0 163 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 ZNF521Q96K83 1311 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 TTC4O95801 387 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 CCDC138Q96M89 665 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 ZNF229Q9UJW7 825 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 KDRP35968 1356 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 TFCP2Q12800 502 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 CUL4BQ13620 913 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 ATP6V0A1Q93050 837 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 AZI2Q9H6S1 392 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 N4BP1O75113 896 aaKnown RBP14.77□□□□□ -0.04
TRIO-202ENST00000344204 PARP1P09874 1014 aaKnown RBP14.77□□□□□ -0.04
TRIO-202ENST00000344204 TNNI2P48788 182 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 MRPS15P82914 257 aaKnown RBP14.77□□□□□ -0.04
TRIO-202ENST00000344204 RARS2Q5T160 578 aaKnown RBP14.77□□□□□ -0.04
TRIO-202ENST00000344204 CATSPER1Q8NEC5 780 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 GSDMAQ96QA5 445 aa14.77□□□□□ -0.04
TRIO-202ENST00000344204 SNX29Q8TEQ0 813 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 CLIC6Q96NY7 704 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 SMYD3Q9H7B4 428 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 HDAC6Q9UBN7 1215 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 GRID2IPA4D2P6 1211 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 CASC4Q6P4E1 433 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 OLFML1Q6UWY5 402 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 LCMT1Q9UIC8 334 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 SEMA3EO15041 775 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 KRT3P12035 628 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 UBN2Q6ZU65 1347 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 MRPS25P82663 173 aaKnown RBP14.77□□□□□ -0.05
TRIO-202ENST00000344204 CHMP2BQ9UQN3 213 aa14.77□□□□□ -0.05
TRIO-202ENST00000344204 ACADSP16219 412 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 SEMA3FQ13275 785 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 KRT31Q15323 416 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 CCDC80Q76M96 950 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 MAGEF1Q9HAY2 307 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 ZBBXA8MT70 800 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 MRPS9P82933 396 aaKnown RBP14.76□□□□□ -0.05
TRIO-202ENST00000344204 SNRNP27Q8WVK2 155 aaKnown RBP14.76□□□□□ -0.05
TRIO-202ENST00000344204 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 RSAD2Q8WXG1 361 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 ABHD10Q9NUJ1 306 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 DBNLQ9UJU6 430 aaKnown RBP14.76□□□□□ -0.05
TRIO-202ENST00000344204 QRICH2Q9H0J4 1663 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 ADCY3O60266 1144 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 SCTRP47872 440 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 AP1B1Q10567 949 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 SWT1Q5T5J6 900 aaKnown RBP14.76□□□□□ -0.05
TRIO-202ENST00000344204 TRIM56Q9BRZ2 755 aaKnown RBP14.76□□□□□ -0.05
TRIO-202ENST00000344204 TSPY3P0CV98 308 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 TSPY8P0CW00 308 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 SERPINB10P48595 397 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 EHD2Q9NZN4 543 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 ANP32DO95626 131 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 EIF4A3P38919 411 aaKnown RBP14.76□□□□□ -0.05
TRIO-202ENST00000344204 BASP1P80723 227 aaKnown RBP14.76□□□□□ -0.05
TRIO-202ENST00000344204 SPATA21Q7Z572 469 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 TPD52L2O43399 206 aaKnown RBP14.76□□□□□ -0.05
TRIO-202ENST00000344204 H2AFZP0C0S5 128 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 KIF11P52732 1056 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 H2AFVQ71UI9 128 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 IL1RAPL1Q9NZN1 696 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 LZTS1Q9Y250 596 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 ABCB4P21439 1286 aa14.76□□□□□ -0.05
TRIO-202ENST00000344204 L2HGDHQ9H9P8 463 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms