RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 TSPY3P0CV98 308 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 TSPY8P0CW00 308 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 DNAJB2P25686 324 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 CDK8P49336 464 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 TFAP4Q01664 338 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 ZNF792Q3KQV3 632 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 TJAP1Q5JTD0 557 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 ANKRD33Q7Z3H0 272 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 BRAPQ7Z569 592 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 RIOX2Q8IUF8 465 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 CLEC10AQ8IUN9 316 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 USP38Q8NB14 1042 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 SYAP1Q96A49 352 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 ZNF396Q96N95 335 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 TOX2Q96NM4 488 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 MMP19Q99542 508 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 MAP3K14Q99558 947 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 SLC26A6Q9BXS9 759 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 RNF26Q9BY78 433 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 GZF1Q9H116 711 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 SH2D4AQ9H788 454 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 CFAP45Q9UL16 551 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 MUC3AQ02505 3323 aa15.5■□□□□ 0.07
HERPUD1-202ENST00000344114 PQBP1O60828 265 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 DEXIO95424 95 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 AKR1A1P14550 325 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 TAL1P17542 331 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 ICA1Q05084 483 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 FAAP100Q0VG06 881 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 TROAPQ12815 778 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 TRIM29Q14134 588 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 CAVIN1Q6NZI2 390 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 SPICE1Q8N0Z3 855 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 CTCFLQ8NI51 663 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 PHKBQ93100 1093 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 TSEN34Q9BSV6 310 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 TMEM39AQ9NV64 488 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 PGK2P07205 417 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 AKR1B1P15121 316 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 KIF5BP33176 963 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 GUCY1B3Q02153 619 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 RCSD1Q6JBY9 416 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 NEDD1Q8NHV4 660 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 SPATA32Q96LK8 384 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 ZNF576Q9H609 170 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 KAT14Q9H8E8 782 aa15.49■□□□□ 0.07
HERPUD1-202ENST00000344114 TTC28Q96AY4 2481 aa15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 TNFRSF10AO00220 468 aa15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 NMT2O60551 498 aa15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 PPFIA3O75145 1194 aa15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 GADD45BO75293 160 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 KCTD2Q14681 263 aa15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 KRT40Q6A162 431 aa15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 CCSAPQ6IQ19 270 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 FAM173BQ6P4H8 233 aa15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 TMTC3Q6ZXV5 915 aa15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 KLHDC9Q8NEP7 349 aa15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 REPS2Q8NFH8 660 aa15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 LENG1Q96BZ8 264 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 CCDC17Q96LX7 622 aa15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 ZNF214Q9UL59 606 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-202ENST00000344114 SYNRGQ9UMZ2 1314 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 MOXD2PA6NHM9 499 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 DCDC2CA8MYV0 355 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 VWA5AO00534 786 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 TIMP1P01033 207 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 COPB2P35606 906 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 STAT3P40763 770 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 ACLYP53396 1101 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 AKAP17AQ02040 695 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 MSL3Q8N5Y2 521 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 PNMA1Q8ND90 353 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 LEO1Q8WVC0 666 aaPredicted RBP15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.47■□□□□ 0.077e-9■■□□□ 13.7
HERPUD1-202ENST00000344114 STARD7Q9NQZ5 370 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 IL17RBQ9NRM6 502 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 FBXO28Q9NVF7 368 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 TBX21Q9UL17 535 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 PPP1R9AQ9ULJ8 1098 aa15.47■□□□□ 0.07
HERPUD1-202ENST00000344114 CNTNAP5Q8WYK1 1306 aa15.46■□□□□ 0.07
HERPUD1-202ENST00000344114 PRPF3O43395 683 aaKnown RBP15.46■□□□□ 0.07
HERPUD1-202ENST00000344114 XBP1P17861 261 aa15.46■□□□□ 0.07
HERPUD1-202ENST00000344114 ZNF445P59923 1031 aa15.46■□□□□ 0.07
HERPUD1-202ENST00000344114 L1TD1Q5T7N2 865 aaKnown RBP15.46■□□□□ 0.07
HERPUD1-202ENST00000344114 RASIP1Q5U651 963 aa15.46■□□□□ 0.07
HERPUD1-202ENST00000344114 MFSD5Q6N075 450 aa15.46■□□□□ 0.07
HERPUD1-202ENST00000344114 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
HERPUD1-202ENST00000344114 TIFAQ96CG3 184 aa15.46■□□□□ 0.07
HERPUD1-202ENST00000344114 AIFM3Q96NN9 605 aa15.46■□□□□ 0.07
HERPUD1-202ENST00000344114 GBF1Q92538 1859 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 SYNGAP1Q96PV0 1343 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 FSD2A1L4K1 749 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 GOLGA6L3A6NEY3 463 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 EEF2P13639 858 aaKnown RBP15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 COL9A1P20849 921 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 CST5P28325 142 aaPredicted RBP15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 GNAQP50148 359 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 FUT2Q10981 343 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 GRM4Q14833 912 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 ZSCAN23Q3MJ62 389 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms