RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 NUP107P57740 925 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 TUBB3Q13509 450 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF530Q6P9A1 599 aaPredicted RBP4.09□□□□□ -1.76
SYNE2-202ENST00000344113 RNF135Q8IUD6 432 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 KLHL31Q9H511 634 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 AOX1Q06278 1338 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 KDM5DQ9BY66 1539 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 AP1B1Q10567 949 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 KRT80Q6KB66 452 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PPP4R1Q8TF05 950 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 BRD9Q9H8M2 597 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SLC3A2P08195 630 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 NAA30Q147X3 362 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 NET1Q7Z628 596 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SYT2Q8N9I0 419 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PROCA1Q8NCQ7 364 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 RUNDC1Q96C34 613 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 LBHD1Q9BQE6 289 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 RSL24D1Q9UHA3 163 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ARHGAP35Q9NRY4 1499 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 GOLGA8TH3BQL2 631 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 RANBP6O60518 1105 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 GOLGA8HP0CJ92 632 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SERPINB1P30740 379 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 DMPKQ09013 629 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CALML6Q8TD86 181 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 STX7O15400 261 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 RGS20O76081 388 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 RXRAP19793 462 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CHMLP26374 656 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CLCN6P51797 869 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ZC3H6P61129 1189 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 DDHD1Q8NEL9 900 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 MPP6Q9NZW5 540 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SLC22A1O15245 554 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ZBED1O96006 694 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 MKRN4PQ13434 485 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 STK38Q15208 465 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ZFATQ9P243 1243 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 IRF6O14896 467 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SART1O43290 800 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 MCF2P10911 925 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 KRT76Q01546 638 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ITGB3BPQ13352 177 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 NAALADL2Q58DX5 795 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PPP6R3Q5H9R7 873 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SULT1C3Q6IMI6 304 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 KIAA2013Q8IYS2 634 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 STX19Q8N4C7 294 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CAB39Q9Y376 341 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PEG3Q9GZU2 1588 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 UBASH3AP57075 661 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CDR2Q01850 454 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 NDUFAF2Q8N183 169 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SUN5Q8TC36 379 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CAPSLQ8WWF8 208 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 MCRS1Q96EZ8 462 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 DESI2Q9BSY9 194 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 RSPH10B2B2RC85 870 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ANKRD65E5RJM6 399 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 RSPH10BP0C881 870 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 TAF11Q15544 211 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 STXBP4Q6ZWJ1 553 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PSMA8Q8TAA3 256 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 OTULINQ96BN8 352 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CHAMP1Q96JM3 812 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 NUP88Q99567 741 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 LSM14BQ9BX40 385 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 DHX36Q9H2U1 1008 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 MID2Q9UJV3 735 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ASAP1Q9ULH1 1129 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ORC6Q9Y5N6 252 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SPATA31E1Q6ZUB1 1445 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SEMA3EO15041 775 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 GUCY1A3Q02108 690 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SULT2A1Q06520 285 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 METTL24Q5JXM2 366 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 VCPKMTQ9H867 229 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 H0Y626 953 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 TRIM16O95361 564 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ADCY1Q08828 1119 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 RARS2Q5T160 578 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 DSTYKQ6XUX3 929 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 TRIM11Q96F44 468 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 TUBGCP5Q96RT8 1024 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SLC30A1Q9Y6M5 507 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ITGB1P05556 798 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PYGBP11216 843 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PRLRP16471 622 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 GSPT2Q8IYD1 628 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 NAPGQ99747 312 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 EVPLLA8MZ36 301 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 TBC1D5Q92609 795 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CDHR1Q96JP9 859 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CNBD2Q96M20 576 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 NOX5Q96PH1 765 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 NUP58Q9BVL2 599 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SPC25Q9HBM1 224 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 TTC34A8MYJ7 566 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms