RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 NYAP1Q6ZVC0 841 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 VSTM4Q8IW00 320 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 GJA10Q969M2 543 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 INTS13Q9NVM9 706 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 PGAP2Q9UHJ9 254 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 MAPK8IP1Q9UQF2 711 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 AP3B2Q13367 1082 aa20.89■□□□□ 0.93
HOXA9-201ENST00000343483 KMT5BQ4FZB7 885 aa20.89■□□□□ 0.93
HOXA9-201ENST00000343483 ZNF526Q8TF50 670 aaPredicted RBP20.89■□□□□ 0.93
HOXA9-201ENST00000343483 ZNF592Q92610 1267 aa20.89■□□□□ 0.93
HOXA9-201ENST00000343483 CDK5RAP3Q96JB5 506 aa20.89■□□□□ 0.93
HOXA9-201ENST00000343483 NAP1L4Q99733 375 aaKnown RBP20.89■□□□□ 0.93
HOXA9-201ENST00000343483 RPS12P25398 132 aaKnown RBP20.89■□□□□ 0.93
HOXA9-201ENST00000343483 ZNF280AP59817 542 aaPredicted RBP20.89■□□□□ 0.93
HOXA9-201ENST00000343483 PAK1Q13153 545 aa20.89■□□□□ 0.93
HOXA9-201ENST00000343483 PDIA5Q14554 519 aa20.89■□□□□ 0.93
HOXA9-201ENST00000343483 MTERF4Q7Z6M4 381 aaKnown RBP20.89■□□□□ 0.93
HOXA9-201ENST00000343483 HAS1Q92839 578 aa20.89■□□□□ 0.93
HOXA9-201ENST00000343483 GJA3Q9Y6H8 435 aa20.89■□□□□ 0.93
HOXA9-201ENST00000343483 LMNB1P20700 586 aa20.88■□□□□ 0.93
HOXA9-201ENST00000343483 GMPSP49915 693 aaPredicted RBP20.88■□□□□ 0.93
HOXA9-201ENST00000343483 CCDC84Q86UT8 332 aaPredicted RBP20.88■□□□□ 0.93
HOXA9-201ENST00000343483 MICALL2Q8IY33 904 aa20.88■□□□□ 0.93
HOXA9-201ENST00000343483 NELFBQ8WX92 580 aa20.88■□□□□ 0.93
HOXA9-201ENST00000343483 UIMC1Q96RL1 719 aa20.88■□□□□ 0.93
HOXA9-201ENST00000343483 SH2D4AQ9H788 454 aa20.88■□□□□ 0.93
HOXA9-201ENST00000343483 VCPKMTQ9H867 229 aa20.88■□□□□ 0.93
HOXA9-201ENST00000343483 RWDD2AQ9UIY3 292 aa20.88■□□□□ 0.93
HOXA9-201ENST00000343483 SPDYE3A6NKU9 549 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 KLRC4O43908 158 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 PRCPP42785 496 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 USP11P51784 963 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 GRB10Q13322 594 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 KCNB1Q14721 858 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 KRT79Q5XKE5 535 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 SAMD1Q6SPF0 538 aaPredicted RBP20.87■□□□□ 0.93
HOXA9-201ENST00000343483 SNX29Q8TEQ0 813 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 KIFC2Q96AC6 838 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 P2RX7Q99572 595 aaKnown RBP20.87■□□□□ 0.93
HOXA9-201ENST00000343483 GLIS2Q9BZE0 524 aaPredicted RBP20.87■□□□□ 0.93
HOXA9-201ENST00000343483 TRIM9Q9C026 710 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 ASNSP08243 561 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 ARHGAP4P98171 946 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 TNFAIP1Q13829 316 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 E4F1Q66K89 784 aaPredicted RBP20.87■□□□□ 0.93
HOXA9-201ENST00000343483 SAMD7Q7Z3H4 446 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 CCDC112Q8NEF3 446 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 PCDHA12Q9UN75 941 aa20.87■□□□□ 0.93
HOXA9-201ENST00000343483 CTIFO43310 598 aaKnown RBP20.86■□□□□ 0.93
HOXA9-201ENST00000343483 HOXA13P31271 388 aaPredicted RBP20.86■□□□□ 0.93
HOXA9-201ENST00000343483 KCNJ6P48051 423 aa20.86■□□□□ 0.93
HOXA9-201ENST00000343483 ASIC1P78348 528 aa20.86■□□□□ 0.93
HOXA9-201ENST00000343483 AMPD3Q01432 767 aa20.86■□□□□ 0.93
HOXA9-201ENST00000343483 CDKAL1Q5VV42 579 aa20.86■□□□□ 0.93
HOXA9-201ENST00000343483 ZNF710Q8N1W2 664 aa20.86■□□□□ 0.93
HOXA9-201ENST00000343483 RHOBTB3O94955 611 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 MAP3K10Q02779 954 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 TBC1D10BQ4KMP7 808 aaPredicted RBP20.85■□□□□ 0.93
HOXA9-201ENST00000343483 MCTP2Q6DN12 878 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 CCDC174Q6PII3 467 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 PNMA5Q96PV4 448 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 FEZ1Q99689 392 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 NUDT12Q9BQG2 462 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 STK17AQ9UEE5 414 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 OPLAHO14841 1288 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 MMP14P50281 582 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 SV2BQ7L1I2 683 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 CHURC1Q8WUH1 139 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 CCDC47Q96A33 483 aaKnown RBP20.85■□□□□ 0.93
HOXA9-201ENST00000343483 C7orf25Q9BPX7 421 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 EXOC1Q9NV70 894 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 ASTN2O75129 1339 aaPredicted RBP20.85■□□□□ 0.93
HOXA9-201ENST00000343483 LTBP3Q9NS15 1303 aa20.85■□□□□ 0.93
HOXA9-201ENST00000343483 FOSP01100 380 aaPredicted RBP20.84■□□□□ 0.93
HOXA9-201ENST00000343483 ADSSL1Q8N142 457 aa20.84■□□□□ 0.93
HOXA9-201ENST00000343483 LARP4BQ92615 738 aaKnown RBP20.84■□□□□ 0.93
HOXA9-201ENST00000343483 TEPSINQ96N21 525 aa20.84■□□□□ 0.93
HOXA9-201ENST00000343483 ZNF341Q9BYN7 854 aa20.84■□□□□ 0.93
HOXA9-201ENST00000343483 BLOC1S4Q9NUP1 217 aa20.84■□□□□ 0.93
HOXA9-201ENST00000343483 CNOT7Q9UIV1 285 aaKnown RBP20.84■□□□□ 0.93
HOXA9-201ENST00000343483 CYP3A7-CYP3A51PA0A087WV96 503 aa20.84■□□□□ 0.93
HOXA9-201ENST00000343483 PHF20L1A8MW92 1017 aa20.84■□□□□ 0.93
HOXA9-201ENST00000343483 CYP3A7P24462 503 aa20.84■□□□□ 0.93
HOXA9-201ENST00000343483 STIM1Q13586 685 aa20.84■□□□□ 0.93
HOXA9-201ENST00000343483 MCM6Q14566 821 aa20.84■□□□□ 0.93
HOXA9-201ENST00000343483 PRR16Q569H4 304 aa20.84■□□□□ 0.93
HOXA9-201ENST00000343483 GIMAP8Q8ND71 665 aaPredicted RBP20.84■□□□□ 0.93
HOXA9-201ENST00000343483 PPP1R13BQ96KQ4 1090 aa20.84■□□□□ 0.93
HOXA9-201ENST00000343483 MYH7BA7E2Y1 1941 aa20.83■□□□□ 0.93
HOXA9-201ENST00000343483 DICER1Q9UPY3 1922 aaKnown RBP20.83■□□□□ 0.93
HOXA9-201ENST00000343483 A0A1B0GTH6 734 aa20.83■□□□□ 0.93
HOXA9-201ENST00000343483 KIF2AO00139 706 aaPredicted RBP20.83■□□□□ 0.93
HOXA9-201ENST00000343483 FZD9O00144 591 aa20.83■□□□□ 0.93
HOXA9-201ENST00000343483 PDE4DQ08499 809 aa20.83■□□□□ 0.93
HOXA9-201ENST00000343483 TRAF1Q13077 416 aa20.83■□□□□ 0.93
HOXA9-201ENST00000343483 SPECC1LQ69YQ0 1117 aa20.83■□□□□ 0.93
HOXA9-201ENST00000343483 APTXQ7Z2E3 356 aaKnown RBP20.83■□□□□ 0.93
HOXA9-201ENST00000343483 CRYGNQ8WXF5 182 aa20.83■□□□□ 0.93
HOXA9-201ENST00000343483 KCNMB3Q9NPA1 279 aa20.83■□□□□ 0.93
HOXA9-201ENST00000343483 SREBF1P36956 1147 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms