RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SLC12A6Q9UHW9 1150 aa10.71□□□□□ -0.69
HOXA1-201ENST00000343060 SALL4Q9UJQ4 1053 aa10.71□□□□□ -0.69
HOXA1-201ENST00000343060 NFU1Q9UMS0 254 aa10.71□□□□□ -0.69
HOXA1-201ENST00000343060 CICQ96RK0 1608 aaPredicted RBP10.71□□□□□ -0.7
HOXA1-201ENST00000343060 SSU72P8A0A1W2PR75 194 aa10.71□□□□□ -0.7
HOXA1-201ENST00000343060 PAEPP09466 180 aa10.71□□□□□ -0.7
HOXA1-201ENST00000343060 MTIF2P46199 727 aaKnown RBP10.71□□□□□ -0.7
HOXA1-201ENST00000343060 ANKRD40Q6AI12 368 aa10.71□□□□□ -0.7
HOXA1-201ENST00000343060 SRBD1Q8N5C6 995 aaKnown RBP10.71□□□□□ -0.7
HOXA1-201ENST00000343060 LRRC15Q8TF66 581 aa10.71□□□□□ -0.7
HOXA1-201ENST00000343060 CASKIN2Q8WXE0 1202 aa10.71□□□□□ -0.7
HOXA1-201ENST00000343060 MTMR8Q96EF0 704 aa10.71□□□□□ -0.7
HOXA1-201ENST00000343060 NOX5Q96PH1 765 aa10.71□□□□□ -0.7
HOXA1-201ENST00000343060 ADAMTS3O15072 1205 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 NCK2O43639 380 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 CALML3P27482 149 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 CXCR5P32302 372 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 SEC24CP53992 1094 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 NLRP5P59047 1200 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 LACTB2Q53H82 288 aaPredicted RBP10.7□□□□□ -0.7
HOXA1-201ENST00000343060 CEP85LQ5SZL2 805 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 C2CD5Q86YS7 1000 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 BANK1Q8NDB2 785 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 BAP1Q92560 729 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 P3H4Q92791 437 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 ZNF622Q969S3 477 aaKnown RBP eCLIP10.7□□□□□ -0.7
HOXA1-201ENST00000343060 INPP4AQ96PE3 977 aaPredicted RBP10.7□□□□□ -0.7
HOXA1-201ENST00000343060 EDEM3Q9BZQ6 932 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 EPB41L5Q9HCM4 733 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 FLT1P17948 1338 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 CACNA1SQ13698 1873 aa10.7□□□□□ -0.7
HOXA1-201ENST00000343060 GOLGA6L7A0A1B0GV03 622 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 M0R2N6 131 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 EPHB6O15197 1021 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 PDE8AO60658 829 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 IFT88Q13099 833 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 RNF187Q5TA31 235 aaPredicted RBP10.69□□□□□ -0.7
HOXA1-201ENST00000343060 MIEF2Q96C03 454 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 FAM205AQ6ZU69 1335 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 LAMB1P07942 1786 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 H0YGN5 161 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 IRS4O14654 1257 aaPredicted RBP10.69□□□□□ -0.7
HOXA1-201ENST00000343060 TRAPPC3O43617 180 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 PRPHP41219 470 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 MAGEA1P43355 309 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 GUCY2DQ02846 1103 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 SNCBQ16143 134 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 CDC37Q16543 378 aaPredicted RBP10.69□□□□□ -0.7
HOXA1-201ENST00000343060 CYB5D1Q6P9G0 228 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 DTHD1Q6ZMT9 781 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 CCDC121Q6ZUS5 278 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 FAM228AQ86W67 206 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 IQCA1Q86XH1 822 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 FUKQ8N0W3 1084 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 SGSM3Q96HU1 749 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 PCMTD1Q96MG8 357 aaPredicted RBP10.69□□□□□ -0.7
HOXA1-201ENST00000343060 C7orf25Q9BPX7 421 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 SH3GLB2Q9NR46 395 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 TMEM59LQ9UK28 342 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 NFS1Q9Y697 457 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 A0A1B0GUL6 1792 aa10.69□□□□□ -0.7
HOXA1-201ENST00000343060 ZSCAN5CA6NGD5 496 aaPredicted RBP10.68□□□□□ -0.7
HOXA1-201ENST00000343060 LAD1O00515 517 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 CES2O00748 559 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 AKR1B10O60218 316 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 GCFC2P16383 781 aaKnown RBP10.68□□□□□ -0.7
HOXA1-201ENST00000343060 NF2P35240 595 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 XRCC4Q13426 336 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 BIRC3Q13489 604 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 VWA3BQ502W6 1294 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 ANKRD20A8PQ5CZ79 823 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 PDXDC1Q6P996 788 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 TMED8Q6PL24 325 aaPredicted RBP10.68□□□□□ -0.7
HOXA1-201ENST00000343060 ARMC9Q7Z3E5 817 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 ZCRB1Q8TBF4 217 aaKnown RBP10.68□□□□□ -0.7
HOXA1-201ENST00000343060 CCDC47Q96A33 483 aaKnown RBP10.68□□□□□ -0.7
HOXA1-201ENST00000343060 MS4A14Q96JA4 679 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 PSMB7Q99436 277 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 OSBPL7Q9BZF2 842 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 TRIM9Q9C026 710 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 VEZTQ9HBM0 779 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 DDX20Q9UHI6 824 aaKnown RBP10.68□□□□□ -0.7
HOXA1-201ENST00000343060 ODF2LQ9ULJ1 636 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 PLAAQ9Y263 795 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.68□□□□□ -0.7
HOXA1-201ENST00000343060 CCDC189A1A4V9 331 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 GMNCA6NCL1 334 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 LRRC53A6NM62 1247 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 E7EVH7 732 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 NKRFO15226 690 aaKnown RBP eCLIP10.68□□□□□ -0.7
HOXA1-201ENST00000343060 ECHS1P30084 290 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 IFFO1Q0D2I5 559 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 BYSLQ13895 437 aaKnown RBP10.68□□□□□ -0.7
HOXA1-201ENST00000343060 MAN2A1Q16706 1144 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 HGSNATQ68CP4 663 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 CENPPQ6IPU0 288 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 TLDC1Q6P9B6 456 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 CCDC84Q86UT8 332 aaPredicted RBP10.68□□□□□ -0.7
HOXA1-201ENST00000343060 BLIDQ8IZY5 108 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms