RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 KAZNQ674X7 775 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 FAM160B2Q86V87 743 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 AATKQ6ZMQ8 1374 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 GSTA1P08263 222 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 GSTA2P09210 222 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 APOA5Q6Q788 366 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 CACNA2D3Q8IZS8 1091 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 SCYL1Q96KG9 808 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 VCX3BQ9H321 246 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 CUEDC2Q9H467 287 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 ANAPC5Q9UJX4 755 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 A6NNZ2 444 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 TUBB8Q3ZCM7 444 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 MTERF2Q49AM1 385 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 TAB3Q8N5C8 712 aaPredicted RBP16.38■□□□□ 0.21
UBE3B-202ENST00000342494 M0R2C6 588 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 TFAMQ00059 246 aaKnown RBP16.38■□□□□ 0.21
UBE3B-202ENST00000342494 LCORLQ8N3X6 602 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 TBCKQ8TEA7 893 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 PCDHA7Q9UN72 937 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 HYOU1Q9Y4L1 999 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 CFAP65Q6ZU64 1925 aaKnown RBP16.38■□□□□ 0.21
UBE3B-202ENST00000342494 USP17L8P0C7I0 530 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 SAT1P21673 171 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 NR2F2P24468 414 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 ANKRD42Q8N9B4 389 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 FBXO18Q8NFZ0 1043 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 PI4K2BQ8TCG2 481 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 SLC12A6Q9UHW9 1150 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 ZNF148Q9UQR1 794 aa16.38■□□□□ 0.21
UBE3B-202ENST00000342494 HEG1Q9ULI3 1381 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 SCRN1Q12765 414 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 THAP12O43422 761 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 PRKAB2O43741 272 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 PSMC2P35998 433 aaKnown RBP16.37■□□□□ 0.21
UBE3B-202ENST00000342494 FOXP4Q8IVH2 680 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-202ENST00000342494 COA7Q96BR5 231 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 SAMD9Q5K651 1589 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 ANKARQ7Z5J8 1434 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 RGS16O15492 202 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-202ENST00000342494 SPATA1Q5VX52 437 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 RPGRIP1Q96KN7 1286 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 AK8Q96MA6 479 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 FOXP1Q9H334 677 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-202ENST00000342494 CAPN12Q6ZSI9 719 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 MGARPQ8TDB4 240 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 IFT122Q9HBG6 1241 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 CLIC4Q9Y696 253 aa16.37■□□□□ 0.21
UBE3B-202ENST00000342494 MYO1FO00160 1098 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 PSAPP07602 524 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 LMNB1P20700 586 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 STX2P32856 288 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 DYNLL2Q96FJ2 89 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 ANTXR1Q9H6X2 564 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 MAD1L1Q9Y6D9 718 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 ELMSAN1Q6PJG2 1045 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 PPP1R16BQ96T49 567 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 ZNF341Q9BYN7 854 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 RBBP5Q15291 538 aaKnown RBP16.36■□□□□ 0.21
UBE3B-202ENST00000342494 PDXDC2PQ6P474 469 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 USP17L2Q6R6M4 530 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 C7orf31Q8N865 590 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 MICAL1Q8TDZ2 1067 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 MAP4K1Q92918 833 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 LMBRD1Q9NUN5 540 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 CPSF3Q9UKF6 684 aaKnown RBP16.36■□□□□ 0.21
UBE3B-202ENST00000342494 MTMR6Q9Y217 621 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 RNF123Q5XPI4 1314 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 ELF1P32519 619 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 ABCD1P33897 745 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 PARD3BQ8TEW8 1205 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 ZBED2Q9BTP6 218 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 ADAT2Q7Z6V5 191 aaKnown RBP16.36■□□□□ 0.21
UBE3B-202ENST00000342494 VCXQ9H320 206 aa16.36■□□□□ 0.21
UBE3B-202ENST00000342494 PPFIA1Q13136 1202 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 NXNQ6DKJ4 435 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 RFX6Q8HWS3 928 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 FAM186BQ8IYM0 893 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 CNOT6LQ96LI5 555 aaKnown RBP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 BSDC1Q9NW68 430 aaPredicted RBP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 GUCY2FP51841 1108 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 SUSD4Q5VX71 490 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 PI16Q6UXB8 463 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 ZBTB33Q86T24 672 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 NOP9Q86U38 636 aaKnown RBP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 EEF2KMTQ96G04 330 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 TMEM206Q9H813 350 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 CFAP74Q9C0B2 1584 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 ATP8B3O60423 1300 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 ZNF233A6NK53 670 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 ASNSP08243 561 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 TROVE2P10155 538 aaKnown RBP eCLIP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 EIF2AK2P19525 551 aaKnown RBP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 CTNNA1P35221 906 aaKnown RBP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 ZNF445P59923 1031 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 MECOMQ03112 1051 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms