RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 GYPCP04921 128 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 SPAG1Q07617 926 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 ERCC6LQ2NKX8 1250 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 TCP11X2Q5H9J9 407 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 FBXO38Q6PIJ6 1188 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 SIAH1Q8IUQ4 282 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 ADSSL1Q8N142 457 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 NAA15Q9BXJ9 866 aaKnown RBP16.85■□□□□ 0.29
TPM3-208ENST00000341485 MRPL44Q9H9J2 332 aaKnown RBP16.85■□□□□ 0.29
TPM3-208ENST00000341485 KBTBD4Q9NVX7 518 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 TAB2Q9NYJ8 693 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 GPRC5DQ9NZD1 345 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 PGAP2Q9UHJ9 254 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 ZBTB21Q9ULJ3 1066 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 KCNJ18B7U540 433 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 N4BP3O15049 544 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 OR52Z1P0C646 297 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 YBX3P16989 372 aaKnown RBP eCLIP16.85■□□□□ 0.29
TPM3-208ENST00000341485 GNA11P29992 359 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 CASP14P31944 242 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 GNG11P61952 73 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 KCNJ12Q14500 433 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 KCNB1Q14721 858 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 TTBK2Q6IQ55 1244 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 GMCL1P1Q8NEA9 526 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 VPS16Q9H269 839 aa16.85■□□□□ 0.29
TPM3-208ENST00000341485 F5H6K3 240 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 CCNT1O60563 726 aaKnown RBP16.84■□□□□ 0.29
TPM3-208ENST00000341485 SLC16A2P36021 539 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 FXR1P51114 621 aaKnown RBP eCLIP16.84■□□□□ 0.29
TPM3-208ENST00000341485 KLRC3Q07444 240 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 ADGRF4Q8IZF3 695 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 TRIM49BA6NDI0 452 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 hCG_1984214I3L0E3 225 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 MYL1P05976 194 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 FECHP22830 423 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 CASQ1P31415 396 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 CAP2P40123 477 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 NEK8Q86SG6 692 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 CABP7Q86V35 215 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 IRF2BP1Q8IU81 584 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 APOBEC3FQ8IUX4 373 aaKnown RBP16.84■□□□□ 0.29
TPM3-208ENST00000341485 ZNF713Q8N859 430 aaPredicted RBP16.84■□□□□ 0.29
TPM3-208ENST00000341485 KIFC2Q96AC6 838 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 AK8Q96MA6 479 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 DEFB129Q9H1M3 183 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 DDX41Q9UJV9 622 aaKnown RBP16.84■□□□□ 0.29
TPM3-208ENST00000341485 ADGRG1Q9Y653 693 aa16.84■□□□□ 0.29
TPM3-208ENST00000341485 RHOBTB3O94955 611 aa16.83■□□□□ 0.28
TPM3-208ENST00000341485 CCDC175P0C221 793 aa16.83■□□□□ 0.28
TPM3-208ENST00000341485 PLCG1P19174 1290 aa16.83■□□□□ 0.28
TPM3-208ENST00000341485 PMS1P54277 932 aaKnown RBP16.83■□□□□ 0.28
TPM3-208ENST00000341485 ANGEL2Q5VTE6 544 aaKnown RBP16.83■□□□□ 0.28
TPM3-208ENST00000341485 CNGA4Q8IV77 575 aa16.83■□□□□ 0.28
TPM3-208ENST00000341485 SMAP1Q8IYB5 467 aaPredicted RBP16.83■□□□□ 0.28
TPM3-208ENST00000341485 TRPM4Q8TD43 1214 aa16.83■□□□□ 0.28
TPM3-208ENST00000341485 TEPSINQ96N21 525 aa16.83■□□□□ 0.28
TPM3-208ENST00000341485 SRRTQ9BXP5 876 aaKnown RBP16.83■□□□□ 0.28
TPM3-208ENST00000341485 JMJD4Q9H9V9 463 aa16.83■□□□□ 0.28
TPM3-208ENST00000341485 OGFRQ9NZT2 677 aa16.83■□□□□ 0.28
TPM3-208ENST00000341485 SYNPO2Q9UMS6 1093 aa16.83■□□□□ 0.28
TPM3-208ENST00000341485 ESYT2A0FGR8 921 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 NDUFB10O96000 172 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 MAP3K10Q02779 954 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 JAKMIP3Q5VZ66 844 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 TBCKQ8TEA7 893 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 CCDC51Q96ER9 411 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 CUEDC2Q9H467 287 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 TMEM260Q9NX78 707 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 BIN2Q9UBW5 565 aaPredicted RBP16.82■□□□□ 0.28
TPM3-208ENST00000341485 PNMA6FA0A0J9YX94 578 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 A0A0U1RQJ8 604 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 RNF225M0QZC1 329 aaPredicted RBP16.82■□□□□ 0.28
TPM3-208ENST00000341485 TADA3O75528 432 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 EPS15P42566 896 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 IKQ13123 557 aaPredicted RBP16.82■□□□□ 0.28
TPM3-208ENST00000341485 ANKRD20A12PQ8NF67 263 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 ATRIPQ8WXE1 791 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 GMCL1Q96IK5 515 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 CARD6Q9BX69 1037 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 MAGEF1Q9HAY2 307 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 GOPCQ9HD26 462 aa16.82■□□□□ 0.28
TPM3-208ENST00000341485 A0A1W2PRG0 241 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 USP17L10C9JJH3 530 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
TPM3-208ENST00000341485 ASNSP08243 561 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 H2AFXP16104 143 aaPredicted RBP16.81■□□□□ 0.28
TPM3-208ENST00000341485 ECE1P42892 770 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 C9orf131Q5VYM1 1079 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 CREBRFQ8IUR6 639 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 REXO1Q8N1G1 1221 aaKnown RBP16.81■□□□□ 0.28
TPM3-208ENST00000341485 GIMAP8Q8ND71 665 aaPredicted RBP16.81■□□□□ 0.28
TPM3-208ENST00000341485 SH2D4AQ9H788 454 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 TPM1P09493 284 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 BMP3P12645 472 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 MAP3K9P80192 1104 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 SEMA3FQ13275 785 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 POTEDQ86YR6 584 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 MNS1Q8NEH6 495 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms