RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 STK32BQ9NY57 414 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 HEXIM1O94992 359 aaKnown RBP13.9□□□□□ -0.18
USP47-202ENST00000339865 TNNC2P02585 160 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 CRLF3Q8IUI8 442 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 PTPRGP23470 1445 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 ANKRD65E5RJM6 399 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 PJA2O43164 708 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 SORBS3O60504 671 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 SRGAP2BP0DMP2 458 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 MORC3Q14149 939 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 NDEL1Q9GZM8 345 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 AZI2Q9H6S1 392 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 PCDHB15Q9Y5E8 787 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 H0Y626 953 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 TRIM16O95361 564 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 PMLP29590 882 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 SNX19Q92543 992 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 NLRP3Q96P20 1036 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 RNF103-CHMP3A0A140T963 221 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 KRT87PA6NCN2 255 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 RPS6KB1P23443 525 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 MKRN3Q13064 507 aaKnown RBP13.89□□□□□ -0.19
USP47-202ENST00000339865 C1orf146Q5VVC0 180 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 FBXW10Q5XX13 1052 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 KLC3Q6P597 504 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 ARHGAP26Q9UNA1 814 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 V9GY48 417 aaPredicted RBP13.89□□□□□ -0.19
USP47-202ENST00000339865 APBA1Q02410 837 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 PSMD2Q13200 908 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 LVRNQ6Q4G3 990 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 NOSTRINQ8IVI9 506 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 LOC102724159A0A0B4J2E5 919 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 KITP10721 976 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 PLTPP55058 493 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 AP2B1P63010 937 aa13.89□□□□□ -0.19
USP47-202ENST00000339865 PWP2Q15269 919 aaKnown RBP13.89□□□□□ -0.19
USP47-202ENST00000339865 PATL1Q86TB9 770 aaKnown RBP13.89□□□□□ -0.19
USP47-202ENST00000339865 TEX13AQ9BXU3 409 aaPredicted RBP13.89□□□□□ -0.19
USP47-202ENST00000339865 ARHGAP10A1A4S6 786 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 RNF113AO15541 343 aaKnown RBP13.88□□□□□ -0.19
USP47-202ENST00000339865 ACTN1P12814 892 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 RAB14P61106 215 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
USP47-202ENST00000339865 PPM1KQ8N3J5 372 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 MYH9P35579 1960 aaKnown RBP13.88□□□□□ -0.19
USP47-202ENST00000339865 ZNF263O14978 683 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 MT-ND3P03897 115 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 SLC9A1P19634 815 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 MCF2L2Q86YR7 1114 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 EPAS1Q99814 870 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 C1orf112Q9NSG2 853 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 HACD3Q9P035 362 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 SEC24BO95487 1268 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 GSNP06396 782 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 RFX6Q8HWS3 928 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 ATP6V0A4Q9HBG4 840 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 PRDM5Q9NQX1 630 aaPredicted RBP13.88□□□□□ -0.19
USP47-202ENST00000339865 MBIPQ9NS73 344 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 SCG2P13521 617 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 HSPA6P17066 643 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 POLR2FP61218 127 aaKnown RBP13.88□□□□□ -0.19
USP47-202ENST00000339865 ICE2Q659A1 982 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 CEP85Q6P2H3 762 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 KRT27Q7Z3Y8 459 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 CNPY4Q8N129 248 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 EEF2KMTQ96G04 330 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 BCS1LQ9Y276 419 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 ZNF445P59923 1031 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 C2orf54Q08AI8 447 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 THOC5Q13769 683 aaKnown RBP13.88□□□□□ -0.19
USP47-202ENST00000339865 CADPS2Q86UW7 1296 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 CCNYQ8ND76 341 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 EXT2Q93063 718 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 CCDC51Q96ER9 411 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 COQ7Q99807 217 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 PAGR1Q9BTK6 254 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 CAB39Q9Y376 341 aaPredicted RBP13.88□□□□□ -0.19
USP47-202ENST00000339865 EXOC1LA0A1B0GW35 172 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 DCTN3O75935 186 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 PYGBP11216 843 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 IL15P40933 162 aaPredicted RBP13.88□□□□□ -0.19
USP47-202ENST00000339865 SLC7A5Q01650 507 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 MAP3K10Q02779 954 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 CC2D2BQ6DHV5 1058 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 LMBR1LQ6UX01 489 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 TDRD7Q8NHU6 1098 aaKnown RBP13.88□□□□□ -0.19
USP47-202ENST00000339865 RABGGTAQ92696 567 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 ARHGEF10LQ9HCE6 1279 aa13.88□□□□□ -0.19
USP47-202ENST00000339865 SNRPA1P09661 255 aaKnown RBP13.87□□□□□ -0.19
USP47-202ENST00000339865 LRRC8BQ6P9F7 803 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 A0A0G2JND7 137 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 CHEK2O96017 543 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 MAGEA9P43362 315 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 SGO2Q562F6 1265 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 NUGGCQ68CJ6 796 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 BTNL9Q6UXG8 535 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 RFX8Q6ZV50 586 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 CABP7Q86V35 215 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms