RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 GBP6Q6ZN66 633 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 POTEDQ86YR6 584 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 IRF2BP1Q8IU81 584 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 VGLL2Q8N8G2 317 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 BCS1LQ9Y276 419 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 ZNF652Q9Y2D9 606 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 CDHR2Q9BYE9 1310 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 CNTNAP5Q8WYK1 1306 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 FGFR1OPO95684 399 aaKnown RBP15.62■□□□□ 0.09
PCDH8-201ENST00000338862 TCP1P17987 556 aaKnown RBP15.62■□□□□ 0.09
PCDH8-201ENST00000338862 PPP2R5BQ15173 497 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 TRADDQ15628 312 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 UBE2SQ16763 222 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 CT47A1Q5JQC4 288 aaPredicted RBP15.62■□□□□ 0.09
PCDH8-201ENST00000338862 ZSCAN29Q8IWY8 852 aaPredicted RBP15.62■□□□□ 0.09
PCDH8-201ENST00000338862 NLRP3Q96P20 1036 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 PLCD4Q9BRC7 762 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 EFCC1Q9HA90 598 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 PSMD14O00487 310 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 DDAH1O94760 285 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 KRT13P13646 458 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 REXO1Q8N1G1 1221 aaKnown RBP15.62■□□□□ 0.09
PCDH8-201ENST00000338862 CABS1Q96KC9 395 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 RPGRIP1Q96KN7 1286 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 ZIM3Q96PE6 472 aa15.62■□□□□ 0.09
PCDH8-201ENST00000338862 SLC16A2P36021 539 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 FAM182BQ5T319 152 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 ZFYVE27Q5T4F4 411 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 RDH13Q8NBN7 331 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 GLIS3Q8NEA6 775 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 FAM153BP0C7A2 387 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 PBX1P40424 430 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 EPHB4P54760 987 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 PAK2Q13177 524 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 KRT71Q3SY84 523 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 FAM153CQ494X1 144 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 VWA3BQ502W6 1294 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 DYDC1Q8WWB3 177 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 CARD10Q9BWT7 1032 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 RAB34Q9BZG1 259 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 THAP9Q9H5L6 903 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 FAM153AQ9UHL3 310 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 RPSAP08865 295 aaKnown RBP15.61■□□□□ 0.09
PCDH8-201ENST00000338862 MICALCLQ6ZW33 695 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 NEK8Q86SG6 692 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 TRIM9Q9C026 710 aa15.61■□□□□ 0.09
PCDH8-201ENST00000338862 MAP2K2P36507 400 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 AMPD2Q01433 879 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 RPS6KA1Q15418 735 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 SH3RF1Q7Z6J0 888 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 SLC4A9Q96Q91 983 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 CEP89Q96ST8 783 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 OVOS2A0A0G2JMS6 1433 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 LTN1O94822 1766 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 ITIH6Q6UXX5 1313 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 SETD1AO15047 1707 aaKnown RBP15.6■□□□□ 0.09
PCDH8-201ENST00000338862 GOLGA8KD6RF30 607 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 C6orf229H3BNL8 230 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 MEIS1O00470 390 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 SRGNP10124 158 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 TMOD1P28289 359 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 GNA11P29992 359 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 GNAQP50148 359 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 DAAM2Q86T65 1068 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 PNMA8AQ86V59 439 aaPredicted RBP15.6■□□□□ 0.09
PCDH8-201ENST00000338862 TBC1D31Q96DN5 1066 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 DHTKD1Q96HY7 919 aaPredicted RBP15.6■□□□□ 0.09
PCDH8-201ENST00000338862 ARHGAP20Q9P2F6 1191 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 PCDHB13Q9Y5F0 798 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 SPATA31A3Q5VYP0 1347 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 BAG3O95817 575 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 NR1D1P20393 614 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 ADCY1Q08828 1119 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 WDR93Q6P2C0 686 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 MGARPQ8TDB4 240 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 EYA3Q99504 573 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 DDX47Q9H0S4 455 aaKnown RBP15.6■□□□□ 0.09
PCDH8-201ENST00000338862 PCDHA6Q9UN73 950 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 PCDHA8Q9Y5H6 950 aa15.6■□□□□ 0.09
PCDH8-201ENST00000338862 TDP2O95551 362 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 IFNAR2P48551 515 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 RPS8P62241 208 aaKnown RBP15.59■□□□□ 0.09
PCDH8-201ENST00000338862 MAEAQ7L5Y9 396 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 CCDC84Q86UT8 332 aaPredicted RBP15.59■□□□□ 0.09
PCDH8-201ENST00000338862 SH3RF3Q8TEJ3 882 aaPredicted RBP15.59■□□□□ 0.09
PCDH8-201ENST00000338862 FAM84BQ96KN1 310 aaPredicted RBP15.59■□□□□ 0.09
PCDH8-201ENST00000338862 PLAAQ9Y263 795 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 RIC1Q4ADV7 1423 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 NPHP3-ACAD11A0A0J9YXS1 232 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 GCOM1H8Y6P7 765 aaPredicted RBP15.59■□□□□ 0.09
PCDH8-201ENST00000338862 MYZAPP0CAP1 466 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 B4GALNT4Q76KP1 1039 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 TEX11Q8IYF3 940 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 CCDC170Q8IYT3 715 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 SPATA20Q8TB22 786 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 RNPC3Q96LT9 517 aaKnown RBP15.59■□□□□ 0.09
PCDH8-201ENST00000338862 PLA2G12BQ9BX93 195 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 C1orf167Q5SNV9 1468 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 RIMBP2O15034 1052 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms