RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SNX17Q15036 470 aa17.69■□□□□ 0.42
PRKN-201ENST00000338468 SLC39A5Q6ZMH5 540 aa17.69■□□□□ 0.42
PRKN-201ENST00000338468 MICU3Q86XE3 530 aa17.69■□□□□ 0.42
PRKN-201ENST00000338468 FANCBQ8NB91 859 aa17.69■□□□□ 0.42
PRKN-201ENST00000338468 JAKMIP1Q96N16 626 aaKnown RBP17.69■□□□□ 0.42
PRKN-201ENST00000338468 GUCD1Q96NT3 240 aa17.69■□□□□ 0.42
PRKN-201ENST00000338468 LZTS2Q9BRK4 669 aa17.69■□□□□ 0.42
PRKN-201ENST00000338468 TSEN34Q9BSV6 310 aaKnown RBP17.69■□□□□ 0.42
PRKN-201ENST00000338468 A0A1W2PQ45 241 aaPredicted RBP17.68■□□□□ 0.42
PRKN-201ENST00000338468 A0A1W2PQY0 241 aa17.68■□□□□ 0.42
PRKN-201ENST00000338468 CFBP00751 764 aa17.68■□□□□ 0.42
PRKN-201ENST00000338468 HMGB1P09429 215 aaKnown RBP17.68■□□□□ 0.42
PRKN-201ENST00000338468 GNAQP50148 359 aa17.68■□□□□ 0.42
PRKN-201ENST00000338468 KCNA10Q16322 511 aa17.68■□□□□ 0.42
PRKN-201ENST00000338468 IQSEC1Q6DN90 963 aa17.68■□□□□ 0.42
PRKN-201ENST00000338468 TMTC3Q6ZXV5 915 aa17.68■□□□□ 0.42
PRKN-201ENST00000338468 PRKAG2Q9UGJ0 569 aa17.68■□□□□ 0.42
PRKN-201ENST00000338468 C6orf222P0C671 652 aaPredicted RBP17.67■□□□□ 0.42
PRKN-201ENST00000338468 ACLYP53396 1101 aa17.67■□□□□ 0.42
PRKN-201ENST00000338468 RTP1P59025 263 aa17.67■□□□□ 0.42
PRKN-201ENST00000338468 PDE4DQ08499 809 aa17.67■□□□□ 0.42
PRKN-201ENST00000338468 ZNF697Q5TEC3 545 aa17.67■□□□□ 0.42
PRKN-201ENST00000338468 NSUN6Q8TEA1 469 aaKnown RBP17.67■□□□□ 0.42
PRKN-201ENST00000338468 FAM161BQ96MY7 647 aa17.67■□□□□ 0.42
PRKN-201ENST00000338468 RMDN3Q96TC7 470 aa17.67■□□□□ 0.42
PRKN-201ENST00000338468 FAM217BQ9NTX9 383 aaPredicted RBP17.67■□□□□ 0.42
PRKN-201ENST00000338468 MOXD2PA6NHM9 499 aa17.66■□□□□ 0.42
PRKN-201ENST00000338468 RPS6KB1P23443 525 aa17.66■□□□□ 0.42
PRKN-201ENST00000338468 HOXA13P31271 388 aaPredicted RBP17.66■□□□□ 0.42
PRKN-201ENST00000338468 BEX3Q00994 111 aa17.66■□□□□ 0.42
PRKN-201ENST00000338468 FUT2Q10981 343 aa17.66■□□□□ 0.42
PRKN-201ENST00000338468 DUSP28Q4G0W2 176 aa17.66■□□□□ 0.42
PRKN-201ENST00000338468 C1orf53Q5VUE5 145 aa17.66■□□□□ 0.42
PRKN-201ENST00000338468 Q6ZUG5 572 aa17.66■□□□□ 0.42
PRKN-201ENST00000338468 TLK2Q86UE8 772 aa17.66■□□□□ 0.42
PRKN-201ENST00000338468 RRP36Q96EU6 259 aaKnown RBP17.66■□□□□ 0.42
PRKN-201ENST00000338468 WDR11Q9BZH6 1224 aa17.66■□□□□ 0.42
PRKN-201ENST00000338468 PXMP2Q9NR77 195 aa17.66■□□□□ 0.42
PRKN-201ENST00000338468 MAP3K20Q9NYL2 800 aaKnown RBP17.66■□□□□ 0.42
PRKN-201ENST00000338468 VCANP13611 3396 aa17.66■□□□□ 0.42
PRKN-201ENST00000338468 KLF18A0A0U1RQI7 1052 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 hCG_1642624A0A1W2PR95 340 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 DYNC1LI2O43237 492 aaPredicted RBP17.65■□□□□ 0.42
PRKN-201ENST00000338468 ZBTB43O43298 467 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 ARIH2O95376 493 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 ASGR1P07306 291 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 EIF2AK2P19525 551 aaKnown RBP17.65■□□□□ 0.42
PRKN-201ENST00000338468 TRAF1Q13077 416 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 TRIM60Q495X7 471 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 GNASQ5JWF2 1037 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 BLOC1S2Q6QNY1 142 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 NOL8Q76FK4 1167 aaKnown RBP17.65■□□□□ 0.42
PRKN-201ENST00000338468 FBXL16Q8N461 479 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 CCDC82Q8N4S0 544 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 SAMD3Q8N6K7 520 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 IWS1Q96ST2 819 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 AGXT2Q9BYV1 514 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 SPC25Q9HBM1 224 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 ATP11BQ9Y2G3 1177 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 Q9Y3F1 56 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 CNTNAP5Q8WYK1 1306 aa17.65■□□□□ 0.42
PRKN-201ENST00000338468 GCOM1H8Y6P7 765 aaPredicted RBP17.64■□□□□ 0.41
PRKN-201ENST00000338468 POLR2MP0CAP2 368 aa17.64■□□□□ 0.41
PRKN-201ENST00000338468 CASTP20810 708 aaKnown RBP17.64■□□□□ 0.41
PRKN-201ENST00000338468 CDC27P30260 824 aa17.64■□□□□ 0.41
PRKN-201ENST00000338468 APOBRQ0VD83 1088 aa17.64■□□□□ 0.41
PRKN-201ENST00000338468 ARHGEF16Q5VV41 709 aa17.64■□□□□ 0.41
PRKN-201ENST00000338468 SYNE3Q6ZMZ3 975 aa17.64■□□□□ 0.41
PRKN-201ENST00000338468 IL31RAQ8NI17 732 aa17.64■□□□□ 0.41
PRKN-201ENST00000338468 MPHOSPH6Q99547 160 aaKnown RBP17.64■□□□□ 0.41
PRKN-201ENST00000338468 PDCD2LQ9BRP1 358 aa17.64■□□□□ 0.41
PRKN-201ENST00000338468 EYSQ5T1H1 3165 aa17.64■□□□□ 0.41
PRKN-201ENST00000338468 NR3C2P08235 984 aa17.63■□□□□ 0.41
PRKN-201ENST00000338468 RCAN1P53805 252 aa17.63■□□□□ 0.41
PRKN-201ENST00000338468 FSCN1Q16658 493 aaKnown RBP17.63■□□□□ 0.41
PRKN-201ENST00000338468 RTN1Q16799 776 aa17.63■□□□□ 0.41
PRKN-201ENST00000338468 CCDC62Q6P9F0 684 aa17.63■□□□□ 0.41
PRKN-201ENST00000338468 PCSK9Q8NBP7 692 aaKnown RBP17.63■□□□□ 0.41
PRKN-201ENST00000338468 SCFD2Q8WU76 684 aa17.63■□□□□ 0.41
PRKN-201ENST00000338468 COPS5Q92905 334 aa17.63■□□□□ 0.41
PRKN-201ENST00000338468 BRF1Q92994 677 aa17.63■□□□□ 0.41
PRKN-201ENST00000338468 AP5M1Q9H0R1 490 aa17.63■□□□□ 0.41
PRKN-201ENST00000338468 ZSWIM6Q9HCJ5 1215 aa17.63■□□□□ 0.41
PRKN-201ENST00000338468 RBM28Q9NW13 759 aaKnown RBP17.63■□□□□ 0.41
PRKN-201ENST00000338468 SEC63Q9UGP8 760 aaKnown RBP17.63■□□□□ 0.41
PRKN-201ENST00000338468 LTBP2Q14767 1821 aa17.63■□□□□ 0.41
PRKN-201ENST00000338468 GOLGA8AA7E2F4 631 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 GOLGA8BA8MQT2 603 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 B4DLN1 442 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 RGS20O76081 388 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 PSMA5P28066 241 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 MRPL12P52815 198 aaKnown RBP17.62■□□□□ 0.41
PRKN-201ENST00000338468 TLE2Q04725 743 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 STXBP2Q15833 593 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 CXCL17Q6UXB2 119 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 STARD7Q9NQZ5 370 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 ELP1O95163 1332 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 FRMPD4Q14CM0 1322 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 NID2Q14112 1375 aa17.62■□□□□ 0.41
PRKN-201ENST00000338468 KIAA1217Q5T5P2 1943 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms