RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TMEM132AQ24JP5 1023 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 GLIS3Q8NEA6 775 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 TBC1D5Q92609 795 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 DDX12PQ92771 950 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 MMS19Q96T76 1030 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 LACRTQ9GZZ8 138 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 CD209Q9NNX6 404 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 LUC7LQ9NQ29 371 aaKnown RBP9.12□□□□□ -0.95
HPS4-201ENST00000336873 KCNK3O14649 394 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 BUB1BO60566 1050 aaPredicted RBP9.11□□□□□ -0.95
HPS4-201ENST00000336873 PRPF6O94906 941 aaKnown RBP9.11□□□□□ -0.95
HPS4-201ENST00000336873 HARSP12081 509 aaKnown RBP9.11□□□□□ -0.95
HPS4-201ENST00000336873 LONP1P36776 959 aaKnown RBP9.11□□□□□ -0.95
HPS4-201ENST00000336873 ATP2C1P98194 919 aaPredicted RBP9.11□□□□□ -0.95
HPS4-201ENST00000336873 ADCY1Q08828 1119 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 ADAM9Q13443 819 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 ALX1Q15699 326 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 KRT25Q7Z3Z0 450 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 RABGGTAQ92696 567 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 PANK4Q9NVE7 773 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 POTEB3A0JP26 581 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 POTECB2RU33 542 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 TRIM66O15016 1216 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 SASH3O75995 380 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 PLA2G4AP47712 749 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 GUCY2DQ02846 1103 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 SEC23AQ15436 765 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 POTEBQ6S5H4 581 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 DPH5Q9H2P9 285 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 PCDHA6Q9UN73 950 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 PCDHA8Q9Y5H6 950 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 MRFAP1Q9Y605 127 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 MED1Q15648 1581 aaPredicted RBP9.11□□□□□ -0.95
HPS4-201ENST00000336873 CNTNAP5Q8WYK1 1306 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 GOLGA6BA6NDN3 693 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 GPSM2P81274 684 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 SLF2Q8IX21 1173 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 MYCT1Q8N699 235 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 UBLCP1Q8WVY7 318 aaPredicted RBP9.11□□□□□ -0.95
HPS4-201ENST00000336873 CUL5Q93034 780 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 AP1M1Q9BXS5 423 aa9.11□□□□□ -0.95
HPS4-201ENST00000336873 A0A1B0GTH6 734 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 POTEFA5A3E0 1075 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 GOLGA6CA6NDK9 693 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 FGFR1OPO95684 399 aaKnown RBP9.1□□□□□ -0.95
HPS4-201ENST00000336873 GOLGA6DP0CG33 693 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 POTEIP0CG38 1075 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 VPS41P49754 854 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 FAM26FQ5R3K3 315 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 IQCEQ6IPM2 695 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 POTEGQ6S5H5 508 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 POTEEQ6S8J3 1075 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 TXLNBQ8N3L3 684 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 BPIFA3Q9BQP9 254 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 BRIP1Q9BX63 1249 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 IL17RBQ9NRM6 502 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 GOLGA6AQ9NYA3 693 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 TMOD2Q9NZR1 351 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 RWDD2AQ9UIY3 292 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 MORC2Q9Y6X9 1032 aaPredicted RBP9.1□□□□□ -0.95
HPS4-201ENST00000336873 OVOS2A0A0G2JMS6 1433 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 LRRC53A6NM62 1247 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 FAM13AO94988 1023 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 PPP2R5BQ15173 497 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 C12orf60Q5U649 245 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 MYOCDQ8IZQ8 938 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 ELMO3Q96BJ8 720 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 MED15Q96RN5 788 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 KRT12Q99456 494 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 PYM1Q9BRP8 204 aaKnown RBP9.1□□□□□ -0.95
HPS4-201ENST00000336873 HSD3B7Q9H2F3 369 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 NDST4Q9H3R1 872 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 PCIF1Q9H4Z3 704 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 SERPINB13Q9UIV8 391 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 CYTH3O43739 400 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 HSF2BPO75031 334 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 KIAA0754O94854 1291 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 EZH2Q15910 746 aaKnown RBP9.1□□□□□ -0.95
HPS4-201ENST00000336873 TAB3Q8N5C8 712 aaPredicted RBP9.1□□□□□ -0.95
HPS4-201ENST00000336873 FAM212AQ96EL1 285 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 PPANQ9NQ55 473 aaKnown RBP9.1□□□□□ -0.95
HPS4-201ENST00000336873 FAM53CQ9NYF3 392 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 MYO1AQ9UBC5 1043 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 FHOD1Q9Y613 1164 aa9.1□□□□□ -0.95
HPS4-201ENST00000336873 RNF40O75150 1001 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 MYCLP12524 364 aaPredicted RBP9.09□□□□□ -0.95
HPS4-201ENST00000336873 NR2F2P24468 414 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 MAP3K9P80192 1104 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 SHROOM1Q2M3G4 852 aaPredicted RBP9.09□□□□□ -0.95
HPS4-201ENST00000336873 SLC9C1Q4G0N8 1177 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 CCDC127Q96BQ5 260 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 NUDT12Q9BQG2 462 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 QTRT2Q9H974 415 aaKnown RBP9.09□□□□□ -0.95
HPS4-201ENST00000336873 PNPLA7Q6ZV29 1317 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 CETN3O15182 167 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 RAD17O75943 681 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 ACTN1P12814 892 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 CDR1P51861 262 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 VAV2P52735 878 aa9.09□□□□□ -0.95
HPS4-201ENST00000336873 CTTNQ14247 550 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms