RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 TMTC3Q6ZXV5 915 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 CCDC84Q86UT8 332 aaPredicted RBP7.16□□□□□ -1.26
HMG20A-201ENST00000336216 FOXP4Q8IVH2 680 aaPredicted RBP7.16□□□□□ -1.26
HMG20A-201ENST00000336216 PAF1Q8N7H5 531 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 SMCR8Q8TEV9 937 aaPredicted RBP7.16□□□□□ -1.26
HMG20A-201ENST00000336216 JAKMIP2Q96AA8 810 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 GJD4Q96KN9 370 aaPredicted RBP7.16□□□□□ -1.26
HMG20A-201ENST00000336216 PLCD4Q9BRC7 762 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 EPN1Q9Y6I3 576 aaPredicted RBP7.16□□□□□ -1.26
HMG20A-201ENST00000336216 JCADQ9P266 1359 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 GOLGA6L7A0A1B0GV03 622 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 ARHGEF35A5YM69 484 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 DDAH1O94760 285 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 ZBTB7AO95365 584 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 GH2P01242 217 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 PLCG1P19174 1290 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 GUCY2FP51841 1108 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 C2orf54Q08AI8 447 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 TXNRD1Q16881 649 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 PPP4R3AQ6IN85 833 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 TTBK2Q6IQ55 1244 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 NIM1KQ8IY84 436 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 CCDC127Q96BQ5 260 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 PAGE5Q96GU1 130 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 PCDHA4Q9UN74 947 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 CDHR2Q9BYE9 1310 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 CLIC2O15247 247 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 EXOC3O60645 756 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 GAS7O60861 476 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 NTSR2O95665 410 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 PTPREP23469 700 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 MAGEA9P43362 315 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 CKAP4Q07065 602 aaKnown RBP7.15□□□□□ -1.26
HMG20A-201ENST00000336216 BIRC3Q13489 604 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 SEPT2Q15019 361 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 STXBP4Q6ZWJ1 553 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 ADGRA1Q86SQ6 560 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 FBXO11Q86XK2 927 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 OR8K1Q8NGG5 319 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 HPS5Q9UPZ3 1129 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 SRPRBQ9Y5M8 271 aaKnown RBP7.15□□□□□ -1.26
HMG20A-201ENST00000336216 SEMA3EO15041 775 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 PRPF3O43395 683 aaKnown RBP7.15□□□□□ -1.26
HMG20A-201ENST00000336216 TTLL1O95922 423 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 GGCXP38435 758 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 FXR1P51114 621 aaKnown RBP eCLIP7.15□□□□□ -1.26
HMG20A-201ENST00000336216 AOC3Q16853 763 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 FBXW10Q5XX13 1052 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 RASGRP2Q7LDG7 609 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 KSR1Q8IVT5 923 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 CHP1Q99653 195 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 BPIFA3Q9BQP9 254 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 TUBGCP2Q9BSJ2 902 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 EFCC1Q9HA90 598 aa7.15□□□□□ -1.26
HMG20A-201ENST00000336216 ZBTB12Q9Y330 459 aaPredicted RBP7.15□□□□□ -1.26
HMG20A-201ENST00000336216 UTYO14607 1347 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 KDM3BQ7LBC6 1761 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 ROBO1Q9Y6N7 1651 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 FRMD3A2A2Y4 597 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 USP17L10C9JJH3 530 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 FLOT1O75955 427 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 SLURP2P0DP57 97 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 WHAMMP3Q1A5X7 153 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 RESP18Q5W5W9 173 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 GBP6Q6ZN66 633 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 EEPD1Q7L9B9 569 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 CCDC25Q86WR0 208 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 KLHL7Q8IXQ5 586 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 TTC16Q8NEE8 873 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 ENOX1Q8TC92 643 aaKnown RBP7.15□□□□□ -1.27
HMG20A-201ENST00000336216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.15□□□□□ -1.27
HMG20A-201ENST00000336216 PAGR1Q9BTK6 254 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 ALDH8A1Q9H2A2 487 aaPredicted RBP7.15□□□□□ -1.27
HMG20A-201ENST00000336216 NHSL1Q5SYE7 1610 aa7.15□□□□□ -1.27
HMG20A-201ENST00000336216 SPATA31A1Q5TZJ5 1347 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 GTPBP6O43824 516 aaPredicted RBP7.14□□□□□ -1.27
HMG20A-201ENST00000336216 EEF2P13639 858 aaKnown RBP7.14□□□□□ -1.27
HMG20A-201ENST00000336216 AKR1B1P15121 316 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 CTNNA2P26232 953 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 HSPA1LP34931 641 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 MAP2K2P36507 400 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 CASP7P55210 303 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 POLR2FP61218 127 aaKnown RBP7.14□□□□□ -1.27
HMG20A-201ENST00000336216 PLCB3Q01970 1234 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 PRR5LQ6MZQ0 368 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 CCDC91Q7Z6B0 441 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 TBC1D5Q92609 795 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 CAPS2Q9BXY5 557 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 PPANQ9NQ55 473 aaKnown RBP7.14□□□□□ -1.27
HMG20A-201ENST00000336216 PARP4Q9UKK3 1724 aaKnown RBP7.14□□□□□ -1.27
HMG20A-201ENST00000336216 AHDC1Q5TGY3 1603 aaPredicted RBP7.14□□□□□ -1.27
HMG20A-201ENST00000336216 HGSO14964 777 aaPredicted RBP7.14□□□□□ -1.27
HMG20A-201ENST00000336216 ZNF185O15231 689 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 MFAP3LO75121 409 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 ABL1P00519 1130 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 COPB1P53618 953 aaKnown RBP7.14□□□□□ -1.27
HMG20A-201ENST00000336216 EVX2Q03828 476 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 EN1Q05925 392 aaPredicted RBP7.14□□□□□ -1.27
HMG20A-201ENST00000336216 KLHL30Q0D2K2 578 aa7.14□□□□□ -1.27
HMG20A-201ENST00000336216 KIAA0753Q2KHM9 967 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms