RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 INAQ16352 499 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 CRLF3Q8IUI8 442 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 LARP6Q9BRS8 491 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 GCOM2Q9BZD3 368 aaPredicted RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 TAB2Q9NYJ8 693 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 WDR62O43379 1518 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 RASSF9O75901 435 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 NLRP11P59045 1033 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 TRADDQ15628 312 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 BZW1Q7L1Q6 419 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 OTUD6AQ7L8S5 288 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 RNF34Q969K3 372 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 TTC1Q99614 292 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 PRDM11Q9NQV5 511 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 TRPC1P48995 793 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 CYTH1Q15438 398 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 DIXDC1Q155Q3 683 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 DZIP3Q86Y13 1208 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 TMEM63CQ9P1W3 806 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 BIN2Q9UBW5 565 aaPredicted RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 ADGRL2O95490 1459 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 HSPA9P38646 679 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 PSMD2Q13200 908 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 TTC6Q86TZ1 520 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 PRPF38AQ8NAV1 312 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ENOX1Q8TC92 643 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 DTX3LQ8TDB6 740 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ARMCX3Q9UH62 379 aaPredicted RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 TSC22D4Q9Y3Q8 395 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 PI4KAP2A4QPH2 592 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 RANBP1P43487 201 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 TNNI2P48788 182 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 DNAL1Q4LDG9 190 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 CDC37L1Q7L3B6 337 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 AGGF1Q8N302 714 aaeCLIP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 PI4KAP1Q8N8J0 262 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 U2AF1L4Q8WU68 220 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 C14orf93Q9H972 538 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 CAPN11Q9UMQ6 739 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ZBTB12Q9Y330 459 aaPredicted RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 SYCE1LA8MT33 242 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 CDH2P19022 906 aaPredicted RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 KIAA2013Q8IYS2 634 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 PARD6BQ9BYG5 372 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 EPN3Q9H201 632 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 MROH5Q6ZUA9 1318 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 H0Y626 953 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 MEIS1O00470 390 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ADCY3O60266 1144 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 TRIM16O95361 564 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ACADSP16219 412 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ADKP55263 362 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 KLC1Q07866 573 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ACBD5Q5T8D3 534 aaPredicted RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 STX18Q9P2W9 335 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 APOBEC2Q9Y235 224 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 A6NJR5 290 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 BFSP1Q12934 665 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ORC2Q13416 577 aaPredicted RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 FLOT2Q14254 428 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 HIBCHQ6NVY1 386 aaPredicted RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 PIK3AP1Q6ZUJ8 805 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ATP6V1G3Q96LB4 118 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 KIAA0556O60303 1618 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 GCNT3O95395 438 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ECE1P42892 770 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 WDR75Q8IWA0 830 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 HACE1Q8IYU2 909 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 CHPF2Q9P2E5 772 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ANAPC5Q9UJX4 755 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ADAM21Q9UKJ8 722 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 TMEM247A6NEH6 219 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 MEFVO15553 781 aaPredicted RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 RPSAP08865 295 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 FBXO38Q6PIJ6 1188 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ING2Q9H160 280 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 MRPL47Q9HD33 250 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ANLNQ9NQW6 1124 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 SUN2Q9UH99 717 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ARL2BPQ9Y2Y0 163 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 FAM177BA6PVY3 158 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 MFAP3P55082 362 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 CHMP6Q96FZ7 201 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 CNBD2Q96M20 576 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ARHGEF10LQ9HCE6 1279 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ZNF212Q9UDV6 495 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 SBNO1A3KN83 1393 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 YTHDC2Q9H6S0 1430 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 CPP00450 1065 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ELF1P32519 619 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 CNGA2Q16280 664 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 SGO2Q562F6 1265 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 FOXP1Q9H334 677 aaPredicted RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.97□□□□□ -1.45
PTPRB-202ENST00000334414 ASXL2Q76L83 1435 aa5.97□□□□□ -1.45
PTPRB-202ENST00000334414 TBKBP1A7MCY6 615 aa5.96□□□□□ -1.45
PTPRB-202ENST00000334414 PAMP19021 973 aa5.96□□□□□ -1.45
PTPRB-202ENST00000334414 PPP2R2AP63151 447 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms