RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 IRX3P78415 501 aaPredicted RBP26.2■■□□□ 1.78
TSKU-201ENST00000333090 UBE4AQ14139 1066 aa26.2■■□□□ 1.78
TSKU-201ENST00000333090 KCTD16Q68DU8 428 aa26.2■■□□□ 1.78
TSKU-201ENST00000333090 MAGEF1Q9HAY2 307 aa26.2■■□□□ 1.78
TSKU-201ENST00000333090 LRRC53A6NM62 1247 aa26.19■■□□□ 1.78
TSKU-201ENST00000333090 LAD1O00515 517 aa26.19■■□□□ 1.78
TSKU-201ENST00000333090 LETM2Q2VYF4 491 aa26.19■■□□□ 1.78
TSKU-201ENST00000333090 VWA3BQ502W6 1294 aa26.19■■□□□ 1.78
TSKU-201ENST00000333090 ALS2CLQ60I27 953 aa26.19■■□□□ 1.78
TSKU-201ENST00000333090 SH2D3CQ8N5H7 860 aa26.19■■□□□ 1.78
TSKU-201ENST00000333090 C7orf25Q9BPX7 421 aa26.19■■□□□ 1.78
TSKU-201ENST00000333090 SIK3Q9Y2K2 1263 aa26.19■■□□□ 1.78
TSKU-201ENST00000333090 PRPHP41219 470 aa26.19■■□□□ 1.78
TSKU-201ENST00000333090 NAP1L1P55209 391 aaKnown RBP26.19■■□□□ 1.78
TSKU-201ENST00000333090 ATP2B2Q01814 1243 aa26.19■■□□□ 1.78
TSKU-201ENST00000333090 MCM9Q9NXL9 1143 aa26.19■■□□□ 1.78
TSKU-201ENST00000333090 ARPP21Q9UBL0 812 aaPredicted RBP26.19■■□□□ 1.78
TSKU-201ENST00000333090 BUB1O43683 1085 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 KRT14P02533 472 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 ATP1A2P50993 1020 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 CNNM4Q6P4Q7 775 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 ZIM3Q96PE6 472 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 IL17RBQ9NRM6 502 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 ATP8A2Q9NTI2 1148 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 GOLGB1Q14789 3259 aaKnown RBP26.18■■□□□ 1.78
TSKU-201ENST00000333090 CCNT1O60563 726 aaKnown RBP26.18■■□□□ 1.78
TSKU-201ENST00000333090 OR52Z1P0C646 297 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 EPB41P11171 864 aaKnown RBP26.18■■□□□ 1.78
TSKU-201ENST00000333090 SLC35G1Q2M3R5 365 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 IQCDQ96DY2 449 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 MS4A14Q96JA4 679 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 POLD4Q9HCU8 107 aa26.18■■□□□ 1.78
TSKU-201ENST00000333090 NDUFAB1O14561 156 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 RASSF7Q02833 373 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 AK8Q96MA6 479 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 TLR10Q9BXR5 811 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 CYTH3O43739 400 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 USP17L8P0C7I0 530 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 PPP1R2P41236 205 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 TECP42680 631 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 DNA2P51530 1060 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 GFPT1Q06210 699 aaPredicted RBP26.17■■□□□ 1.78
TSKU-201ENST00000333090 PTF1AQ7RTS3 328 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 CAVIN3Q969G5 261 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 MTMR8Q96EF0 704 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 MAD2L2Q9UI95 211 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 A0A1B0GUL6 1792 aa26.17■■□□□ 1.78
TSKU-201ENST00000333090 PRDX5P30044 214 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 INPP5BP32019 993 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 AMPD3Q01432 767 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 FBXW10Q5XX13 1052 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 BARHL2Q9NY43 387 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 STXBP3O00186 592 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 LCA5LO95447 670 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 KLRK1P26718 216 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 SUGP1Q8IWZ8 645 aaKnown RBP26.16■■□□□ 1.78
TSKU-201ENST00000333090 ESYT3A0FGR9 886 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 SKOR1P84550 965 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 NNTQ13423 1086 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 DAGLBQ8NCG7 672 aa26.16■■□□□ 1.78
TSKU-201ENST00000333090 COL22A1Q8NFW1 1626 aaPredicted RBP26.15■■□□□ 1.78
TSKU-201ENST00000333090 ZEB2O60315 1214 aa26.15■■□□□ 1.78
TSKU-201ENST00000333090 GRM4Q14833 912 aa26.15■■□□□ 1.78
TSKU-201ENST00000333090 CENPPQ6IPU0 288 aa26.15■■□□□ 1.78
TSKU-201ENST00000333090 SLC51AQ86UW1 340 aa26.15■■□□□ 1.78
TSKU-201ENST00000333090 DGKHQ86XP1 1220 aa26.15■■□□□ 1.78
TSKU-201ENST00000333090 NFU1Q9UMS0 254 aa26.15■■□□□ 1.78
TSKU-201ENST00000333090 JAG2Q9Y219 1238 aa26.15■■□□□ 1.78
TSKU-201ENST00000333090 ZSCAN5CA6NGD5 496 aaPredicted RBP26.15■■□□□ 1.78
TSKU-201ENST00000333090 GLI1P08151 1106 aa26.15■■□□□ 1.78
TSKU-201ENST00000333090 CCDC84Q86UT8 332 aaPredicted RBP26.15■■□□□ 1.78
TSKU-201ENST00000333090 IFT81Q8WYA0 676 aa26.15■■□□□ 1.78
TSKU-201ENST00000333090 CCDC43Q96MW1 224 aaKnown RBP26.15■■□□□ 1.78
TSKU-201ENST00000333090 NOX5Q96PH1 765 aa26.15■■□□□ 1.78
TSKU-201ENST00000333090 MINPP1Q9UNW1 487 aa26.15■■□□□ 1.78
TSKU-201ENST00000333090 USP17L3A6NCW0 530 aa26.14■■□□□ 1.78
TSKU-201ENST00000333090 USP17L4A6NCW7 530 aa26.14■■□□□ 1.78
TSKU-201ENST00000333090 SLC1A4P43007 532 aa26.14■■□□□ 1.78
TSKU-201ENST00000333090 CARSP49589 748 aaKnown RBP26.14■■□□□ 1.78
TSKU-201ENST00000333090 GNAQP50148 359 aa26.14■■□□□ 1.78
TSKU-201ENST00000333090 MAN2A1Q16706 1144 aa26.14■■□□□ 1.78
TSKU-201ENST00000333090 ERFEQ4G0M1 354 aa26.14■■□□□ 1.78
TSKU-201ENST00000333090 TDRD12Q587J7 1177 aaKnown RBP26.14■■□□□ 1.78
TSKU-201ENST00000333090 KLHDC7AQ5VTJ3 777 aa26.14■■□□□ 1.78
TSKU-201ENST00000333090 GALNT17Q6IS24 598 aa26.14■■□□□ 1.78
TSKU-201ENST00000333090 USP17L1Q7RTZ2 530 aa26.14■■□□□ 1.78
TSKU-201ENST00000333090 CACNA2D4Q7Z3S7 1137 aa26.14■■□□□ 1.78
TSKU-201ENST00000333090 DYNLL2Q96FJ2 89 aa26.14■■□□□ 1.78
TSKU-201ENST00000333090 ZPR1O75312 459 aa26.14■■□□□ 1.77
TSKU-201ENST00000333090 GOLGA8HP0CJ92 632 aa26.14■■□□□ 1.77
TSKU-201ENST00000333090 CFAP221Q4G0U5 840 aa26.14■■□□□ 1.77
TSKU-201ENST00000333090 SBK1Q52WX2 424 aa26.14■■□□□ 1.77
TSKU-201ENST00000333090 TMC4Q7Z404 712 aa26.14■■□□□ 1.77
TSKU-201ENST00000333090 CPVLQ9H3G5 476 aa26.14■■□□□ 1.77
TSKU-201ENST00000333090 CFAP58Q5T655 872 aa26.13■■□□□ 1.77
TSKU-201ENST00000333090 POTEDQ86YR6 584 aa26.13■■□□□ 1.77
TSKU-201ENST00000333090 IFT20Q8IY31 132 aa26.13■■□□□ 1.77
TSKU-201ENST00000333090 DOT1LQ8TEK3 1739 aa26.13■■□□□ 1.77
TSKU-201ENST00000333090 FAM153BP0C7A2 387 aa26.13■■□□□ 1.77
TSKU-201ENST00000333090 TNFRSF8P28908 595 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms