RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 BCAMP50895 628 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 SMTNP53814 917 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 CDK17Q00537 523 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 PREPLQ4J6C6 727 aaPredicted RBP20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 CCDC181Q5TID7 509 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 EMC10Q5UCC4 262 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 C8orf74Q6P047 294 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 KRT26Q7Z3Y9 468 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 CCDC43Q96MW1 224 aaKnown RBP20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 KLC4Q9NSK0 619 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 EHD2Q9NZN4 543 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 PRKAB2O43741 272 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 USO1O60763 962 aaKnown RBP20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 PPP1R37O75864 691 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 MOCS3O95396 460 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 TDO2P48775 406 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 FUT2Q10981 343 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 NPY5RQ15761 445 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 CCDC13Q8IYE1 715 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 MAGEB6Q8N7X4 407 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 AKT1S1Q96B36 256 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 UBAC1Q9BSL1 405 aa20.09■□□□□ 0.81
CLSTN3-202ENST00000331148 RASSF9O75901 435 aa20.08■□□□□ 0.81
CLSTN3-202ENST00000331148 NR1D1P20393 614 aa20.08■□□□□ 0.81
CLSTN3-202ENST00000331148 RASGRF1Q13972 1273 aa20.08■□□□□ 0.81
CLSTN3-202ENST00000331148 CCDC40Q4G0X9 1142 aa20.08■□□□□ 0.81
CLSTN3-202ENST00000331148 FKBP15Q5T1M5 1219 aa20.08■□□□□ 0.81
CLSTN3-202ENST00000331148 CFAP58Q5T655 872 aa20.08■□□□□ 0.81
CLSTN3-202ENST00000331148 IQCKQ8N0W5 287 aa20.08■□□□□ 0.81
CLSTN3-202ENST00000331148 MYCBPAPQ8TBZ2 947 aa20.08■□□□□ 0.81
CLSTN3-202ENST00000331148 PSMB7Q99436 277 aa20.08■□□□□ 0.81
CLSTN3-202ENST00000331148 TUBGCP2Q9BSJ2 902 aa20.08■□□□□ 0.81
CLSTN3-202ENST00000331148 PRPF3O43395 683 aaKnown RBP20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 CXCR5P32302 372 aa20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 ELF1P32519 619 aa20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 NLRP14Q86W24 1093 aa20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 CCDC42Q96M95 316 aa20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 IFIH1Q9BYX4 1025 aaKnown RBP20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 ANKRD2Q9GZV1 360 aa20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 GGA2Q9UJY4 613 aa20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 TNRC6CQ9HCJ0 1690 aaKnown RBP20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 HDLBPQ00341 1268 aaKnown RBP20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 PPP2R5BQ15173 497 aa20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 TTI2Q6NXR4 508 aa20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 CCT8L2Q96SF2 557 aa20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 RBM12Q9NTZ6 932 aaKnown RBP20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 V9GY48 417 aaPredicted RBP20.07■□□□□ 0.8
CLSTN3-202ENST00000331148 A0A1B0GUL6 1792 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 PLEKP08567 350 aaPredicted RBP20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 STAT6P42226 847 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 TBC1D8BQ0IIM8 1120 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 SEC23AQ15436 765 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 NOC3LQ8WTT2 800 aaKnown RBP20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 ALS2CR12Q96Q35 445 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 NACAP1Q9BZK3 213 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 PCDHA13Q9Y5I0 950 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 TNKSO95271 1327 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 RGPD3A6NKT7 1758 aaPredicted RBP20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 RGPD4Q7Z3J3 1758 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 MYH6P13533 1939 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 PSMA7O14818 248 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 PLEKHA8P1O95397 391 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 MYCNP04198 464 aaPredicted RBP20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 PAFAH1B1P43034 410 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 SEC24CP53992 1094 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 GLE1Q53GS7 698 aaKnown RBP20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 EP400NLQ6ZTU2 488 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 CD302Q8IX05 232 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 IFT20Q8IY31 132 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 PIK3R5Q8WYR1 880 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 PCMTD1Q96MG8 357 aaPredicted RBP20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 SLC40A1Q9NP59 571 aa20.06■□□□□ 0.8
CLSTN3-202ENST00000331148 A0A1W2PQJ5 194 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 CLSTN1O94985 981 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 FAM153BP0C7A2 387 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 MCM7P33993 719 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 IFT88Q13099 833 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 FAM153CQ494X1 144 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 CAVIN4Q5BKX8 364 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 FLAD1Q8NFF5 587 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 RNF41Q9H4P4 317 aaPredicted RBP20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 GDF3Q9NR23 364 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 FAM153AQ9UHL3 310 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 WTIPA6NIX2 430 aaPredicted RBP20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 NCK2O43639 380 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 FAM107AO95990 144 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 MDH1P40925 334 aaKnown RBP20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 CARSP49589 748 aaKnown RBP20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 PAK2Q13177 524 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 DRP2Q13474 957 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 GRAPQ13588 217 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 KCNB1Q14721 858 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 WLSQ5T9L3 541 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 COL23A1Q86Y22 540 aaPredicted RBP20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 LCORLQ8N3X6 602 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 MREGQ8N565 214 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 GRAPLQ8TC17 118 aaPredicted RBP20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 DUSP9Q99956 384 aaKnown RBP20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 NFU1Q9UMS0 254 aa20.05■□□□□ 0.8
CLSTN3-202ENST00000331148 SLC4A4Q9Y6R1 1079 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms