RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 PITPNM3Q9BZ71 974 aa17.86■□□□□ 0.45
SMAD3-201ENST00000327367 CACNB1Q02641 598 aaPredicted RBP17.85■□□□□ 0.45
SMAD3-201ENST00000327367 EXOC3L4Q17RC7 722 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 KBTBD3Q8NAB2 608 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 GJA10Q969M2 543 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 ARPP21Q9UBL0 812 aaPredicted RBP17.85■□□□□ 0.45
SMAD3-201ENST00000327367 EYA2O00167 538 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 GTPBP6O43824 516 aaPredicted RBP17.85■□□□□ 0.45
SMAD3-201ENST00000327367 LRRN2O75325 713 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 ABL1P00519 1130 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 NPR1P16066 1061 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 BASP1P80723 227 aaKnown RBP17.85■□□□□ 0.45
SMAD3-201ENST00000327367 ABCF3Q9NUQ8 709 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 H3BRJ5 948 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 CPP00450 1065 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 C1orf146Q5VVC0 180 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 TRIM59Q8IWR1 403 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 CCDC195A0A1B0GUA6 201 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 ACTN1P12814 892 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 PLCB4Q15147 1175 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 SUPT20HQ8NEM7 779 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 NOP56O00567 594 aaKnown RBP17.85■□□□□ 0.45
SMAD3-201ENST00000327367 TSPY1Q01534 308 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 CCDC85BQ15834 202 aaPredicted RBP17.85■□□□□ 0.45
SMAD3-201ENST00000327367 OLFML2BQ68BL8 750 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 REXO1Q8N1G1 1221 aaKnown RBP17.85■□□□□ 0.45
SMAD3-201ENST00000327367 CCHCR1Q8TD31 782 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 MAN1B1Q9UKM7 699 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
SMAD3-201ENST00000327367 WBP4O75554 376 aaKnown RBP17.84■□□□□ 0.45
SMAD3-201ENST00000327367 CCDC90BQ9GZT6 254 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 PPARGC1AQ9UBK2 798 aaKnown RBP17.84■□□□□ 0.45
SMAD3-201ENST00000327367 PCDHA13Q9Y5I0 950 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 CC2D1AQ6P1N0 951 aaPredicted RBP17.84■□□□□ 0.45
SMAD3-201ENST00000327367 AOX1Q06278 1338 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 HMGB1P1B2RPK0 211 aaPredicted RBP17.84■□□□□ 0.45
SMAD3-201ENST00000327367 ZNF654Q8IZM8 581 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 TTC17Q96AE7 1141 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 CCDC68Q9H2F9 335 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 C1orf112Q9NSG2 853 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 EFCAB5A4FU69 1503 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 GOLGA8HP0CJ92 632 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 RINT1Q6NUQ1 792 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 RNF217Q8TC41 542 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 SMCR8Q8TEV9 937 aaPredicted RBP17.84■□□□□ 0.45
SMAD3-201ENST00000327367 ATP6V1E2Q96A05 226 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 TTC1Q99614 292 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 AZI2Q9H6S1 392 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 CAPN9O14815 690 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 RAP1GDS1P52306 607 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 MYL7Q01449 175 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 MAPKAPK5Q8IW41 473 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 NEK9Q8TD19 979 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 ZNF653Q96CK0 615 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 FMO2Q99518 471 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 ZFP69BQ9UJL9 534 aa17.84■□□□□ 0.45
SMAD3-201ENST00000327367 HNRNPCL2B2RXH8 293 aa17.83■□□□□ 0.45
SMAD3-201ENST00000327367 HNRNPCL1O60812 293 aaKnown RBP17.83■□□□□ 0.45
SMAD3-201ENST00000327367 CA4P22748 312 aa17.83■□□□□ 0.45
SMAD3-201ENST00000327367 EIF4A3P38919 411 aaKnown RBP17.83■□□□□ 0.45
SMAD3-201ENST00000327367 NBPF20Q3BBV1 942 aa17.83■□□□□ 0.45
SMAD3-201ENST00000327367 KIF1CO43896 1103 aaKnown RBP17.83■□□□□ 0.45
SMAD3-201ENST00000327367 DR1Q01658 176 aa17.83■□□□□ 0.45
SMAD3-201ENST00000327367 FLOT2Q14254 428 aa17.83■□□□□ 0.45
SMAD3-201ENST00000327367 C10orf76Q5T2E6 689 aa17.83■□□□□ 0.45
SMAD3-201ENST00000327367 CDC26Q8NHZ8 85 aa17.83■□□□□ 0.45
SMAD3-201ENST00000327367 ZC3H12CQ9C0D7 883 aaKnown RBP17.83■□□□□ 0.45
SMAD3-201ENST00000327367 KLC4Q9NSK0 619 aa17.83■□□□□ 0.45
SMAD3-201ENST00000327367 ARHGEF9O43307 516 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 MAPK4P31152 587 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 PTGDRQ13258 359 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 CDAN1Q8IWY9 1227 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 GINM1Q9NU53 330 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 HAUS2Q9NVX0 235 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 MAP3K5Q99683 1374 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 NEK2P51955 445 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 TFAP4Q01664 338 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 GJC2Q5T442 439 aaPredicted RBP17.83■□□□□ 0.44
SMAD3-201ENST00000327367 CXorf56Q9H5V9 222 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 TCP10Q12799 353 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 SPOPLQ6IQ16 392 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 BLIDQ8IZY5 108 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.83■□□□□ 0.44
SMAD3-201ENST00000327367 DEPDC1BQ8WUY9 529 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 TRPC6Q9Y210 931 aa17.83■□□□□ 0.44
SMAD3-201ENST00000327367 USP27XA6NNY8 438 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 PFKFB2O60825 505 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 GFPT2O94808 682 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 ADCK5Q3MIX3 580 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 ANGPTL3Q9Y5C1 460 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 EPRSP07814 1512 aaKnown RBP17.82■□□□□ 0.44
SMAD3-201ENST00000327367 USP19O94966 1318 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 POLR3AO14802 1390 aaPredicted RBP17.82■□□□□ 0.44
SMAD3-201ENST00000327367 SYCE1LA8MT33 242 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 PIK3CAP42336 1068 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 SLC1A4P43007 532 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 NSFP46459 744 aaKnown RBP17.82■□□□□ 0.44
SMAD3-201ENST00000327367 PUM3Q15397 648 aaKnown RBP17.82■□□□□ 0.44
SMAD3-201ENST00000327367 ATG16L1Q676U5 607 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 TRIML1Q8N9V2 468 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms