RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 PAGR1Q9BTK6 254 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
ABCF1-201ENST00000326195 FANCLQ9NW38 375 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 MTMR4Q9NYA4 1195 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 RTEL1Q9NZ71 1219 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 RAB21Q9UL25 225 aa11.56□□□□□ -0.56
ABCF1-201ENST00000326195 F5H6K3 240 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 CCP110O43303 1012 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 ZSCAN12O43309 604 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 KLRC3Q07444 240 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 DCAF15Q66K64 600 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 HEATR3Q7Z4Q2 680 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 LZTFL1Q9NQ48 299 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 CBFA2T2O43439 604 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 ABL1P00519 1130 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 CAP2P40123 477 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 KRT40Q6A162 431 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 USP50Q70EL3 339 aaPredicted RBP11.55□□□□□ -0.56
ABCF1-201ENST00000326195 SRGAP1Q7Z6B7 1085 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 FANCBQ8NB91 859 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 LINC00301Q8NCQ3 95 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 JPH2Q9BR39 696 aaPredicted RBP11.55□□□□□ -0.56
ABCF1-201ENST00000326195 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.55□□□□□ -0.56
ABCF1-201ENST00000326195 KLRF2D3W0D1 207 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 RNF40O75150 1001 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 TTLL1O95922 423 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 CCT5P48643 541 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 RCSD1Q6JBY9 416 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 TRMT1LQ7Z2T5 733 aaKnown RBP11.55□□□□□ -0.56
ABCF1-201ENST00000326195 VSTM4Q8IW00 320 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 GDAP1L1Q96MZ0 367 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 VPS54Q9P1Q0 977 aa11.55□□□□□ -0.56
ABCF1-201ENST00000326195 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
ABCF1-201ENST00000326195 NEDD1Q8NHV4 660 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 BAG1Q99933 345 aaPredicted RBP11.54□□□□□ -0.56
ABCF1-201ENST00000326195 BPIFA3Q9BQP9 254 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 CCDC196A0A1B0GTZ2 297 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 IRF6O14896 467 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 ARHGAP6O43182 974 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 USP2O75604 605 aaPredicted RBP11.54□□□□□ -0.56
ABCF1-201ENST00000326195 FLOT1O75955 427 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 KIAA1755Q5JYT7 1200 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 RASGRP4Q8TDF6 673 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 COA7Q96BR5 231 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 PRPF6O94906 941 aaKnown RBP11.54□□□□□ -0.56
ABCF1-201ENST00000326195 PARP1P09874 1014 aaKnown RBP11.54□□□□□ -0.56
ABCF1-201ENST00000326195 TOP1P11387 765 aaKnown RBP11.54□□□□□ -0.56
ABCF1-201ENST00000326195 PFKFB1P16118 471 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 ZNF157P51786 506 aaPredicted RBP11.54□□□□□ -0.56
ABCF1-201ENST00000326195 NLRP12P59046 1061 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 SATB1Q01826 763 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 GABPAQ06546 454 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 FAM71BQ8TC56 605 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 TMEM87BQ96K49 555 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
ABCF1-201ENST00000326195 FAM83AQ86UY5 434 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 EGFL6Q8IUX8 553 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 TC2NQ8N9U0 490 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 NOA1Q8NC60 698 aaKnown RBP11.53□□□□□ -0.56
ABCF1-201ENST00000326195 MSANTD4Q8NCY6 345 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 MRIQ9BWK5 157 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 FAM169AQ9Y6X4 670 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 QSER1Q2KHR3 1735 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 USP17L10C9JJH3 530 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 NDUFB10O96000 172 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 ASNSP08243 561 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 IREB2P48200 963 aaKnown RBP11.53□□□□□ -0.56
ABCF1-201ENST00000326195 SPECC1Q5M775 1068 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 C2orf69Q8N8R5 385 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 ZBED3Q96IU2 234 aaPredicted RBP11.53□□□□□ -0.56
ABCF1-201ENST00000326195 PIGSQ96S52 555 aa11.53□□□□□ -0.56
ABCF1-201ENST00000326195 A0A1W2PQ27 194 aa11.52□□□□□ -0.56
ABCF1-201ENST00000326195 A0A1W2PQ64 194 aa11.52□□□□□ -0.56
ABCF1-201ENST00000326195 A0A1W2PQD8 194 aa11.52□□□□□ -0.56
ABCF1-201ENST00000326195 PES1O00541 588 aaKnown RBP11.52□□□□□ -0.56
ABCF1-201ENST00000326195 EIF3JO75822 258 aaKnown RBP11.52□□□□□ -0.56
ABCF1-201ENST00000326195 MYCP01106 439 aaPredicted RBP11.52□□□□□ -0.56
ABCF1-201ENST00000326195 TMEM179Q6ZVK1 233 aa11.52□□□□□ -0.56
ABCF1-201ENST00000326195 ARHGEF10LQ9HCE6 1279 aa11.52□□□□□ -0.56
ABCF1-201ENST00000326195 GBA2Q9HCG7 927 aaPredicted RBP11.52□□□□□ -0.56
ABCF1-201ENST00000326195 SWAP70Q9UH65 585 aa11.52□□□□□ -0.56
ABCF1-201ENST00000326195 FER1L6Q2WGJ9 1857 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 MYO1FO00160 1098 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 ORC4O43929 436 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 IBSPP21815 317 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-201ENST00000326195 UBXN2AP68543 259 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 PPP2R5AQ15172 486 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 HSP90B2PQ58FF3 399 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 IGSF22Q8N9C0 903 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 CD248Q9HCU0 757 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 POLR3EQ9NVU0 708 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 HERC5Q9UII4 1024 aaKnown RBP11.52□□□□□ -0.57
ABCF1-201ENST00000326195 HPS5Q9UPZ3 1129 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 SOWAHDA6NJG2 315 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 KIF1CO43896 1103 aaKnown RBP11.52□□□□□ -0.57
ABCF1-201ENST00000326195 FDPSP14324 419 aaKnown RBP11.52□□□□□ -0.57
ABCF1-201ENST00000326195 KIF23Q02241 960 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-201ENST00000326195 TTC19Q6DKK2 380 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-201ENST00000326195 ARMC9Q7Z3E5 817 aa11.52□□□□□ -0.57
ABCF1-201ENST00000326195 TICAM2Q86XR7 235 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms