RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 GUCY2DQ02846 1103 aa16.82■□□□□ 0.28
VARS2-201ENST00000321897 SF3B2Q13435 895 aaKnown RBP16.82■□□□□ 0.28
VARS2-201ENST00000321897 HS2ST1Q7LGA3 356 aa16.82■□□□□ 0.28
VARS2-201ENST00000321897 NOA1Q8NC60 698 aaKnown RBP16.82■□□□□ 0.28
VARS2-201ENST00000321897 DDX25Q9UHL0 483 aaKnown RBP16.82■□□□□ 0.28
VARS2-201ENST00000321897 CDHR2Q9BYE9 1310 aa16.82■□□□□ 0.28
VARS2-201ENST00000321897 ZNF34Q8IZ26 560 aa16.82■□□□□ 0.28
VARS2-201ENST00000321897 FUT8Q9BYC5 575 aa16.82■□□□□ 0.28
VARS2-201ENST00000321897 BACH1O14867 736 aa16.82■□□□□ 0.28
VARS2-201ENST00000321897 CAMTA2O94983 1202 aa16.82■□□□□ 0.28
VARS2-201ENST00000321897 TOB1P50616 345 aaPredicted RBP16.82■□□□□ 0.28
VARS2-201ENST00000321897 KRT71Q3SY84 523 aa16.82■□□□□ 0.28
VARS2-201ENST00000321897 ADGRG1Q9Y653 693 aa16.82■□□□□ 0.28
VARS2-201ENST00000321897 DNM2P50570 870 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 NSMFQ6X4W1 530 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 DPH6Q7L8W6 267 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 NSUN4Q96CB9 384 aaKnown RBP16.81■□□□□ 0.28
VARS2-201ENST00000321897 LONP1P36776 959 aaKnown RBP16.81■□□□□ 0.28
VARS2-201ENST00000321897 EHHADHQ08426 723 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 NCAPGQ9BPX3 1015 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 DISC1Q9NRI5 854 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 PNKPQ96T60 521 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 STK38LQ9Y2H1 464 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 TTC26A0AVF1 554 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 MFAP3LO75121 409 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 TDP2O95551 362 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 MAP3K9P80192 1104 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 FAM26FQ5R3K3 315 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 MYOCDQ8IZQ8 938 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 HAUS4Q9H6D7 363 aa16.81■□□□□ 0.28
VARS2-201ENST00000321897 FTCDO95954 541 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 SLC9C1Q4G0N8 1177 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 ANKS4BQ8N8V4 417 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 NKX2-3Q8TAU0 364 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 TCP11Q8WWU5 503 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 LARP4BQ92615 738 aaKnown RBP16.8■□□□□ 0.28
VARS2-201ENST00000321897 TEKT1Q969V4 418 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 MRRFQ96E11 262 aaKnown RBP16.8■□□□□ 0.28
VARS2-201ENST00000321897 LRRC27Q9C0I9 530 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 TMEM60Q9H2L4 133 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 XDHP47989 1333 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 CCDC169A6NNP5 214 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 APBA3O96018 575 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 TCP11X2Q5H9J9 407 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 ZNF658Q5TYW1 1059 aaPredicted RBP16.8■□□□□ 0.28
VARS2-201ENST00000321897 IFT20Q8IY31 132 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 SH2D3AQ9BRG2 576 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 TCHPQ9BT92 498 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 SELENOOQ9BVL4 669 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 PANK4Q9NVE7 773 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 ESYT3A0FGR9 886 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 MOCS3O95396 460 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 KIAA0753Q2KHM9 967 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 DNM3Q9UQ16 869 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 NEURL4Q96JN8 1562 aa16.8■□□□□ 0.28
VARS2-201ENST00000321897 NDUFA10O95299 355 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 PTPAQ15257 358 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 SLFN13Q68D06 897 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 TTBK2Q6IQ55 1244 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 REXO1L1PQ8IX06 675 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 SH2D3CQ8N5H7 860 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 P2RX5Q93086 422 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 SERPINB13Q9UIV8 391 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 CETN1Q12798 172 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 CERKLQ49MI3 558 aaPredicted RBP16.79■□□□□ 0.28
VARS2-201ENST00000321897 LRCH2Q5VUJ6 765 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 MIGA2Q7L4E1 593 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 MGARPQ8TDB4 240 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 KCNK9Q9NPC2 374 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 ABCC12Q96J65 1359 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 CLGNO14967 610 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 ADAM9Q13443 819 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 RAD9BQ6WBX8 426 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 PTF1AQ7RTS3 328 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 LINC00116Q8NCU8 138 aa16.79■□□□□ 0.28
VARS2-201ENST00000321897 GCOM1H8Y6P7 765 aaPredicted RBP16.78■□□□□ 0.28
VARS2-201ENST00000321897 MYZAPP0CAP1 466 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 SLURP2P0DP57 97 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 ICA1Q05084 483 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 TRIM14Q14142 442 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 PFKFB3Q16875 520 aaPredicted RBP16.78■□□□□ 0.28
VARS2-201ENST00000321897 MUM1L1Q5H9M0 696 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 CCDC170Q8IYT3 715 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 PPP1R12CQ9BZL4 782 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 KCNK3O14649 394 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 CD44P16070 742 aaKnown RBP16.78■□□□□ 0.28
VARS2-201ENST00000321897 KLK7P49862 253 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 TNNC1P63316 161 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 PAK2Q13177 524 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 NOX5Q96PH1 765 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 CD209Q9NNX6 404 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 SAMD15Q9P1V8 674 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.78■□□□□ 0.28
VARS2-201ENST00000321897 GJA3Q9Y6H8 435 aa16.78■□□□□ 0.28
VARS2-201ENST00000321897 NTSR2O95665 410 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 EIF4A3P38919 411 aaKnown RBP16.77■□□□□ 0.28
VARS2-201ENST00000321897 NNTQ13423 1086 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 ASIC2Q16515 512 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 SFMBT2Q5VUG0 894 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 BRIP1Q9BX63 1249 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms