RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 TRIM43BA6NCK2 446 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 CCDC69A6NI79 296 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 B4DLN1 442 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 CFBP00751 764 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 RXRAP19793 462 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 KIF5BP33176 963 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 MRPL12P52815 198 aaKnown RBP11.51□□□□□ -0.57
CCDC65-202ENST00000320516 MDM2Q00987 491 aaPredicted RBP11.51□□□□□ -0.57
CCDC65-202ENST00000320516 NFXL1Q6ZNB6 911 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 DHX32Q7L7V1 743 aaKnown RBP11.51□□□□□ -0.57
CCDC65-202ENST00000320516 SRBD1Q8N5C6 995 aaKnown RBP11.51□□□□□ -0.57
CCDC65-202ENST00000320516 SAMD3Q8N6K7 520 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 SCFD2Q8WU76 684 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 TRIM43Q96BQ3 446 aaPredicted RBP11.51□□□□□ -0.57
CCDC65-202ENST00000320516 IWS1Q96ST2 819 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 LZTS2Q9BRK4 669 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 AP5M1Q9H0R1 490 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 PPP4R2Q9NY27 417 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 PQBP1O60828 265 aaKnown RBP11.51□□□□□ -0.57
CCDC65-202ENST00000320516 ARIH2O95376 493 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 PLEKHA8P1O95397 391 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 CLTBP09497 229 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 ITGB8P26012 769 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 HSPA4P34932 840 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 GNAQP50148 359 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 FAAP100Q0VG06 881 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 TRAF1Q13077 416 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 CCDC62Q6P9F0 684 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 CXCL17Q6UXB2 119 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 SLC43A3Q8NBI5 491 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 PXMP2Q9NR77 195 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 PRKAG2Q9UGJ0 569 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 SLC12A7Q9Y666 1083 aa11.51□□□□□ -0.57
CCDC65-202ENST00000320516 GRIN2DO15399 1336 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 A0A0U1RQG5 324 aaPredicted RBP11.5□□□□□ -0.57
CCDC65-202ENST00000320516 ARVCFO00192 962 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 KIAA0355O15063 1070 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 NKRFO15226 690 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC65-202ENST00000320516 CABYRO75952 493 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 CALM1P0DP23 149 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 CALM2P0DP24 149 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 CALM3P0DP25 149 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 HOXA13P31271 388 aaPredicted RBP11.5□□□□□ -0.57
CCDC65-202ENST00000320516 KRT32Q14532 448 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 PPP2R5BQ15173 497 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 STXBP2Q15833 593 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 ARHGEF16Q5VV41 709 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 TDHQ8IZJ6 230 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 CMTR1Q8N1G2 835 aaKnown RBP11.5□□□□□ -0.57
CCDC65-202ENST00000320516 FANCBQ8NB91 859 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 TCEANC2Q96MN5 208 aa11.5□□□□□ -0.57
CCDC65-202ENST00000320516 UBE2OQ9C0C9 1292 aaKnown RBP11.5□□□□□ -0.57
CCDC65-202ENST00000320516 PRDM5Q9NQX1 630 aaPredicted RBP11.5□□□□□ -0.57
CCDC65-202ENST00000320516 NR3C2P08235 984 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 EIF2AK2P19525 551 aaKnown RBP11.49□□□□□ -0.57
CCDC65-202ENST00000320516 TTLL4Q14679 1199 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 APOA5Q6Q788 366 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 RAB11FIP4Q86YS3 637 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 FAM126BQ8IXS8 530 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 COPS5Q92905 334 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 RRP36Q96EU6 259 aaKnown RBP11.49□□□□□ -0.57
CCDC65-202ENST00000320516 LBHD1Q9BQE6 289 aaPredicted RBP11.49□□□□□ -0.57
CCDC65-202ENST00000320516 PDCD2LQ9BRP1 358 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 TBX21Q9UL17 535 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 BRPF3Q9ULD4 1205 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 MROH7Q68CQ1 1323 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 DCDC2CA8MYV0 355 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 GCOM1H8Y6P7 765 aaPredicted RBP11.49□□□□□ -0.57
CCDC65-202ENST00000320516 SOX1O00570 391 aaPredicted RBP11.49□□□□□ -0.57
CCDC65-202ENST00000320516 ZEB2O60315 1214 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 EIF3JO75822 258 aaKnown RBP11.49□□□□□ -0.57
CCDC65-202ENST00000320516 POLR2MP0CAP2 368 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 TXNP10599 105 aaKnown RBP11.49□□□□□ -0.57
CCDC65-202ENST00000320516 LRIT3Q3SXY7 679 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 SEPT14Q6ZU15 432 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 TMTC3Q6ZXV5 915 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 VSIG10LQ86VR7 867 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 MICU3Q86XE3 530 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 OR6J1Q8NGC5 347 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 PIBF1Q8WXW3 757 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 BADQ92934 168 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 VTI1AQ96AJ9 217 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 SNX14Q9Y5W7 946 aa11.49□□□□□ -0.57
CCDC65-202ENST00000320516 FRMPD4Q14CM0 1322 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 KIAA1217Q5T5P2 1943 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 A6NJR5 290 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 EPB41L2O43491 1005 aaKnown RBP11.48□□□□□ -0.57
CCDC65-202ENST00000320516 RGS20O76081 388 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 REC8O95072 547 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 CD4P01730 458 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 HMGB1P09429 215 aaKnown RBP11.48□□□□□ -0.57
CCDC65-202ENST00000320516 CPT1AP50416 773 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 PURAQ00577 322 aaKnown RBP11.48□□□□□ -0.57
CCDC65-202ENST00000320516 FUT2Q10981 343 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 ITGA7Q13683 1181 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 PGM5Q15124 567 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 IL31RAQ8NI17 732 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 TMEM39AQ9NV64 488 aa11.48□□□□□ -0.57
CCDC65-202ENST00000320516 DDX41Q9UJV9 622 aaKnown RBP11.48□□□□□ -0.57
CCDC65-202ENST00000320516 PIK3CDO00329 1044 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms