RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 DIS3Q9Y2L1 958 aaKnown RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 SLC12A7Q9Y666 1083 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 NDUFB9Q9Y6M9 179 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 FRMPD4Q14CM0 1322 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 ADM5C9JUS6 153 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 DEXIO95424 95 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 BMP3P12645 472 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 AKR1B1P15121 316 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 CALML3P27482 149 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 ANTXR2P58335 489 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 PRPF38BQ5VTL8 546 aaKnown RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 APOA5Q6Q788 366 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 MOXD1Q6UVY6 613 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 STOX1Q6ZVD7 989 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 MCF2L2Q86YR7 1114 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 TRIM22Q8IYM9 498 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 PNMA1Q8ND90 353 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 ARMC2Q8NEN0 867 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 SMARCC2Q8TAQ2 1214 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 GTF3C6Q969F1 213 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 GLIS2Q9BZE0 524 aaPredicted RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 IL25Q9H293 177 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 KIAA1217Q5T5P2 1943 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 PFASO15067 1338 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 FRMPD3Q5JV73 1810 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 K7ELQ4 463 aaPredicted RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 PIK3CDO00329 1044 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 RANBP6O60518 1105 aaKnown RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 HSPA6P17066 643 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 STAT2P52630 851 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 TROAPQ12815 778 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 AP3B2Q13367 1082 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 RTN1Q16799 776 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 CATSPERGQ6ZRH7 1159 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 TMTC3Q6ZXV5 915 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 PRPF38AQ8NAV1 312 aaKnown RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 CEP95Q96GE4 821 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 TMEM47Q9BQJ4 181 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 COL25A1Q9BXS0 654 aaPredicted RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 SEZ6LQ9BYH1 1024 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 MROH8Q9H579 483 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 PGPEP1Q9NXJ5 209 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 SAP30BPQ9UHR5 308 aaKnown RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 LCTP09848 1927 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 FAM155AB1AL88 458 aaPredicted RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 B4E1Z4 1266 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 H3BM21 787 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 BMP15O95972 392 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 EGFRP00533 1210 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 FOSP01100 380 aaPredicted RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 GH2P01242 217 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 PDHBP11177 359 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 PTMSP20962 102 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 MAP2K1Q02750 393 aaPredicted RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 FAM110CQ1W6H9 321 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 NBPF20Q3BBV1 942 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 SLF1Q9BQI6 1058 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 KLF16Q9BXK1 252 aaPredicted RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 IL17RBQ9NRM6 502 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 SLC5A4Q9NY91 659 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 PPP1R9AQ9ULJ8 1098 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 JAG2Q9Y219 1238 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 ZNFX1Q9P2E3 1918 aaKnown RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 PNMA6FA0A0J9YX94 578 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 SHTN1A0MZ66 631 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 STRNO43815 780 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 ZBED4O75132 1171 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 EEF2P13639 858 aaKnown RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 ANP32AP39687 249 aaKnown RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 PHKA2P46019 1235 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 TRAPPC10P48553 1259 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 METAP2P50579 478 aaKnown RBP eCLIP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 TCP10Q12799 353 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 TOB2Q14106 344 aaPredicted RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 COG2Q14746 738 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 SYDE2Q5VT97 1194 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 SLFN13Q68D06 897 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 Q6ZUG5 572 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 CYB5R4Q7L1T6 521 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 NIPA1Q7RTP0 329 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 RIOX2Q8IUF8 465 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 DHX37Q8IY37 1157 aaKnown RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 JMYQ8N9B5 988 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 FANCBQ8NB91 859 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 OPTNQ96CV9 577 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 RRP36Q96EU6 259 aaKnown RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 ZFYVE28Q9HCC9 887 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 STK17AQ9UEE5 414 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 MRPL11Q9Y3B7 192 aaKnown RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 GOLGA8AA7E2F4 631 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 GOLGA8BA8MQT2 603 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 STAU1O95793 577 aaKnown RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 CYP2D6P10635 497 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 MAPK4P31152 587 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 MOGSQ13724 837 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 DEFB115Q30KQ5 88 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 CST9Q5W186 159 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 ZFPM1Q8IX07 1006 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 GPR161Q8N6U8 529 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms