RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 MYL3P08590 195 aa20.62■□□□□ 0.89
TPM1-203ENST00000317516 SUPT20HL2P0C7V6 817 aa20.62■□□□□ 0.89
TPM1-203ENST00000317516 EPHB4P54760 987 aa20.62■□□□□ 0.89
TPM1-203ENST00000317516 CASC1Q6TDU7 716 aa20.62■□□□□ 0.89
TPM1-203ENST00000317516 CHST3Q7LGC8 479 aa20.62■□□□□ 0.89
TPM1-203ENST00000317516 TMTC2Q8N394 836 aa20.62■□□□□ 0.89
TPM1-203ENST00000317516 MTG1Q9BT17 334 aaPredicted RBP20.62■□□□□ 0.89
TPM1-203ENST00000317516 PPP1R12CQ9BZL4 782 aa20.62■□□□□ 0.89
TPM1-203ENST00000317516 RIOX1Q9H6W3 641 aa20.62■□□□□ 0.89
TPM1-203ENST00000317516 STXBP5LQ9Y2K9 1186 aa20.62■□□□□ 0.89
TPM1-203ENST00000317516 GRIN2DO15399 1336 aa20.61■□□□□ 0.89
TPM1-203ENST00000317516 A6NJR5 290 aa20.61■□□□□ 0.89
TPM1-203ENST00000317516 EIF3JO75822 258 aaKnown RBP20.61■□□□□ 0.89
TPM1-203ENST00000317516 PSMC6P62333 389 aa20.61■□□□□ 0.89
TPM1-203ENST00000317516 PURAQ00577 322 aaKnown RBP20.61■□□□□ 0.89
TPM1-203ENST00000317516 TROAPQ12815 778 aa20.61■□□□□ 0.89
TPM1-203ENST00000317516 SEPT14Q6ZU15 432 aa20.61■□□□□ 0.89
TPM1-203ENST00000317516 STOX1Q6ZVD7 989 aa20.61■□□□□ 0.89
TPM1-203ENST00000317516 HOMER1Q86YM7 354 aa20.61■□□□□ 0.89
TPM1-203ENST00000317516 IGDCC4Q8TDY8 1250 aa20.61■□□□□ 0.89
TPM1-203ENST00000317516 ESYT1Q9BSJ8 1104 aa20.61■□□□□ 0.89
TPM1-203ENST00000317516 HIPK3Q9H422 1215 aa20.61■□□□□ 0.89
TPM1-203ENST00000317516 TAF6LQ9Y6J9 622 aa20.61■□□□□ 0.89
TPM1-203ENST00000317516 PNMA6FA0A0J9YX94 578 aa20.6■□□□□ 0.89
TPM1-203ENST00000317516 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.6■□□□□ 0.89
TPM1-203ENST00000317516 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.6■□□□□ 0.89
TPM1-203ENST00000317516 CSF2RAP15509 400 aa20.6■□□□□ 0.89
TPM1-203ENST00000317516 HSD17B4P51659 736 aa20.6■□□□□ 0.89
TPM1-203ENST00000317516 MB21D2Q8IYB1 491 aaPredicted RBP20.6■□□□□ 0.89
TPM1-203ENST00000317516 MAP3K14Q99558 947 aa20.6■□□□□ 0.89
TPM1-203ENST00000317516 TRPV6Q9H1D0 765 aa20.6■□□□□ 0.89
TPM1-203ENST00000317516 ALDH8A1Q9H2A2 487 aaPredicted RBP20.6■□□□□ 0.89
TPM1-203ENST00000317516 COL20A1Q9P218 1284 aa20.6■□□□□ 0.89
TPM1-203ENST00000317516 B4GALT4O60513 344 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 GH1P01241 217 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 NR3C2P08235 984 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 EIF2AK2P19525 551 aaKnown RBP20.59■□□□□ 0.89
TPM1-203ENST00000317516 KIF5BP33176 963 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 MCM5P33992 734 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 GHRHRQ02643 423 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 BMP2KLQ5H9B9 411 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 CCDC62Q6P9F0 684 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 PSRC1Q6PGN9 363 aaPredicted RBP20.59■□□□□ 0.89
TPM1-203ENST00000317516 CTCFLQ8NI51 663 aaPredicted RBP20.59■□□□□ 0.89
TPM1-203ENST00000317516 COPS5Q92905 334 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 PIGSQ96S52 555 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 LSG1Q9H089 658 aaKnown RBP20.59■□□□□ 0.89
TPM1-203ENST00000317516 SENP2Q9HC62 589 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 PXMP2Q9NR77 195 aa20.59■□□□□ 0.89
TPM1-203ENST00000317516 LTBP2Q14767 1821 aa20.58■□□□□ 0.89
TPM1-203ENST00000317516 GCOM1H8Y6P7 765 aaPredicted RBP20.58■□□□□ 0.89
TPM1-203ENST00000317516 PPP1R11O60927 126 aaPredicted RBP20.58■□□□□ 0.89
TPM1-203ENST00000317516 POLR2MP0CAP2 368 aa20.58■□□□□ 0.89
TPM1-203ENST00000317516 CYP2C18P33260 490 aa20.58■□□□□ 0.89
TPM1-203ENST00000317516 ANTXR2P58335 489 aa20.58■□□□□ 0.89
TPM1-203ENST00000317516 TMEM87BQ96K49 555 aa20.58■□□□□ 0.89
TPM1-203ENST00000317516 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.58■□□□□ 0.891e-6■□□□□ 10.6
TPM1-203ENST00000317516 ANO2Q9NQ90 1003 aa20.58■□□□□ 0.89
TPM1-203ENST00000317516 OPLAHO14841 1288 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 PRC1O43663 620 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 DDAH1O94760 285 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 ARIH2O95376 493 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 GNAQP50148 359 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 PTPN11Q06124 597 aaPredicted RBP20.57■□□□□ 0.88
TPM1-203ENST00000317516 LY6KQ17RY6 165 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 NBPF20Q3BBV1 942 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 FAM47CQ5HY64 1035 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 TMEM240Q5SV17 173 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 RNF20Q5VTR2 975 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 NFRKBQ6P4R8 1299 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 KCNV1Q6PIU1 500 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 NFXL1Q6ZNB6 911 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 RPUSD2Q8IZ73 545 aaKnown RBP20.57■□□□□ 0.88
TPM1-203ENST00000317516 SLC17A8Q8NDX2 589 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 FAM161BQ96MY7 647 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 LZTS2Q9BRK4 669 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 MTIF3Q9H2K0 278 aaKnown RBP20.57■□□□□ 0.88
TPM1-203ENST00000317516 IL23AQ9NPF7 189 aa20.57■□□□□ 0.88
TPM1-203ENST00000317516 TMEM265A0A087WTH1 108 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 CCDC69A6NI79 296 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 SLC27A2O14975 620 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 CYTH3O43739 400 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 CASTP20810 708 aaKnown RBP20.56■□□□□ 0.88
TPM1-203ENST00000317516 SMARCA1P28370 1054 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 ZNF365Q70YC5 407 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 C16orf59Q7L2K0 433 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 ZNF654Q8IZM8 581 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 PDCD2LQ9BRP1 358 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 NOC4LQ9BVI4 516 aaKnown RBP20.56■□□□□ 0.88
TPM1-203ENST00000317516 SEMA6BQ9H3T3 888 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 LY9Q9HBG7 655 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 MRVI1Q9Y6F6 885 aa20.56■□□□□ 0.88
TPM1-203ENST00000317516 FGBP02675 491 aa20.55■□□□□ 0.88
TPM1-203ENST00000317516 CALM1P0DP23 149 aa20.55■□□□□ 0.88
TPM1-203ENST00000317516 CALM2P0DP24 149 aa20.55■□□□□ 0.88
TPM1-203ENST00000317516 CALM3P0DP25 149 aa20.55■□□□□ 0.88
TPM1-203ENST00000317516 ACRP10323 421 aa20.55■□□□□ 0.88
TPM1-203ENST00000317516 MYCLP12524 364 aaPredicted RBP20.55■□□□□ 0.88
TPM1-203ENST00000317516 HOXA13P31271 388 aaPredicted RBP20.55■□□□□ 0.88
TPM1-203ENST00000317516 CCL23P55773 120 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms