RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 NOP14P78316 857 aaKnown RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 IFIT5Q13325 482 aaKnown RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 TAF11Q15544 211 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 INF2Q27J81 1249 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 HS2ST1Q7LGA3 356 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 TXNDC2Q86VQ3 553 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 SRRM1Q8IYB3 904 aaKnown RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 MXD3Q9BW11 206 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 POLKQ9UBT6 870 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CACNA1GO43497 2377 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 XIRP2A4UGR9 3374 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 ZMYM6O95789 1325 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 USP42Q9H9J4 1324 aaKnown RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 FANCMQ8IYD8 2048 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 FRMD3A2A2Y4 597 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 PI4KAP2A4QPH2 592 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 PPP1R37O75864 691 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CLTAP09496 248 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 PLCG2P16885 1265 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 ZNF530Q6P9A1 599 aaPredicted RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CHST3Q7LGC8 479 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CCDC82Q8N4S0 544 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 PI4KAP1Q8N8J0 262 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 PPP4R1Q8TF05 950 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 SIRT1Q96EB6 747 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CHMP6Q96FZ7 201 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 FMO2Q99518 471 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 NOC4LQ9BVI4 516 aaKnown RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 SEPT3Q9UH03 358 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 MED23Q9ULK4 1368 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 SLIT1O75093 1534 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 GHRP10912 638 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 SERPINB8P50452 374 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 SYDE1Q6ZW31 735 aaPredicted RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 PASD1Q8IV76 773 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 MAP4K1Q92918 833 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CCDC97Q96F63 343 aaPredicted RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 NRXN1Q9ULB1 1477 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 WASLO00401 505 aaPredicted RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 C21orf2O43822 256 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 USP14P54578 494 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 KDM7AQ6ZMT4 941 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 USP6NLQ92738 828 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 RGL1Q9NZL6 768 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 TATP17735 454 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 LRRC63Q05C16 580 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 PSMD2Q13200 908 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 MTX1Q13505 466 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 KLC3Q6P597 504 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CCDC80Q76M96 950 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 RASGRP2Q7LDG7 609 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CROCCP3Q8IVE0 287 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ABTB2Q8N961 1025 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 KBTBD3Q8NAB2 608 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ARHGEF2Q92974 986 aaKnown RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 KIF9Q9HAQ2 790 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 RAB21Q9UL25 225 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 PNMA2Q9UL42 364 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 MATR3P43243 847 aaKnown RBP eCLIP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 PCYT1AP49585 367 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 NLRP6P59044 892 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ARHGAP4P98171 946 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 IDI1Q13907 227 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 HHATQ5VTY9 493 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 GRAMD4Q6IC98 578 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CENPUQ71F23 418 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 HEATR3Q7Z4Q2 680 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 UIMC1Q96RL1 719 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 VCPKMTQ9H867 229 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ZC4H2Q9NQZ6 224 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 MID2Q9UJV3 735 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 NEO1Q92859 1461 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CHD3Q12873 2000 aaKnown RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 MAN1A2O60476 641 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 MFAP3LO75121 409 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ANXA1P04083 346 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 MARCKSP29966 332 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CLCN2P51788 898 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ASIC1P78348 528 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 COG7P83436 770 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 LIN9Q5TKA1 542 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 UNC5CLQ8IV45 518 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CATSPER2Q96P56 530 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CNNM1Q9NRU3 951 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 HAUS2Q9NVX0 235 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 FRMD4BQ9Y2L6 1034 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 PFASO15067 1338 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 AP2B1P63010 937 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 PPP2R2AP63151 447 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ASPHQ12797 758 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ME3Q16798 604 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 SV2BQ7L1I2 683 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 TTC6Q86TZ1 520 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ZGRF1Q86YA3 2104 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 VWDEQ8N2E2 1590 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CRACR2BQ8N4Y2 399 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CSGALNACT2Q8N6G5 542 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CNPY3Q9BT09 278 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 PHACTR1Q9C0D0 580 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ZNF407Q9C0G0 2248 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms