RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 MTMR4Q9NYA4 1195 aa19.2■□□□□ 0.66
SCAMP4-201ENST00000316097 HDAC6Q9UBN7 1215 aa19.2■□□□□ 0.66
SCAMP4-201ENST00000316097 XBP1P17861 261 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 NLRP5P59047 1200 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 PFKFB3Q16875 520 aaPredicted RBP19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 RASGRP4Q8TDF6 673 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 RIN2Q8WYP3 895 aaPredicted RBP19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 SYMPKQ92797 1274 aaKnown RBP19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 GDAP1L1Q96MZ0 367 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 SERPINA10Q9UK55 444 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 JRKLQ9Y4A0 524 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 MYH8P13535 1937 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 PALM3A6NDB9 673 aaPredicted RBP19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 RAD21O60216 631 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 KRT9P35527 623 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 KRT2P35908 639 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 USP14P54578 494 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 SH3RF1Q7Z6J0 888 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 VIPAS39Q9H9C1 493 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 TAB2Q9NYJ8 693 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 QSER1Q2KHR3 1735 aa19.19■□□□□ 0.66
SCAMP4-201ENST00000316097 TCP10L2B9ZVM9 353 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 PRPF6O94906 941 aaKnown RBP19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 HLA-DOAP06340 250 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 AARSP49588 968 aaKnown RBP eCLIP19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 GSDMAQ96QA5 445 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 PSMD1Q99460 953 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 CHP1Q99653 195 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 HPCAL4Q9UM19 191 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 SHTN1A0MZ66 631 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 TRIM75PA6NK02 468 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 HEATR3Q7Z4Q2 680 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 FKBP1AP62942 108 aaKnown RBP19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 CCDC178Q5BJE1 867 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 RSBN1LQ6PCB5 846 aaPredicted RBP19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 TRAPPC11Q7Z392 1133 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 MMS19Q96T76 1030 aa19.18■□□□□ 0.66
SCAMP4-201ENST00000316097 ZMYND10O75800 440 aa19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 PARP1P09874 1014 aaKnown RBP19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 POLD1P28340 1107 aa19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 COPB1P53618 953 aaKnown RBP19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 MAP9Q49MG5 647 aa19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 PIK3AP1Q6ZUJ8 805 aa19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 MRIQ9BWK5 157 aa19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 REXO2Q9Y3B8 237 aaKnown RBP19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 EPN1Q9Y6I3 576 aaPredicted RBP19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 SRGAP2O75044 1071 aa19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 GDF11O95390 407 aa19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 CAPZA3Q96KX2 299 aa19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 MTFR1LQ9H019 292 aa19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 BLZF1Q9H2G9 400 aa19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 GPCPD1Q9NPB8 672 aa19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 LIMA1Q9UHB6 759 aaKnown RBP19.17■□□□□ 0.66
SCAMP4-201ENST00000316097 NDUFA10O95299 355 aa19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 HDLBPQ00341 1268 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 ZNF174Q15697 407 aa19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 DALRD3Q5D0E6 543 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 DNAJC21Q5F1R6 531 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 RRAGBQ5VZM2 374 aa19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 IDI2Q9BXS1 227 aa19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 TFR2Q9UP52 801 aa19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 BCS1LQ9Y276 419 aa19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 MYH6P13533 1939 aa19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 ATP1A1P05023 1023 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 STIM1Q13586 685 aa19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 CDAN1Q8IWY9 1227 aa19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 GSPT2Q8IYD1 628 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-201ENST00000316097 PDHBP11177 359 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 JAG1P78504 1218 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 COG1Q8WTW3 980 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 TNFRSF25Q93038 417 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 PIGSQ96S52 555 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 IGKV6D-41A0A0C4DH26 115 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 VIL1P09327 827 aaKnown RBP19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 MCM3P25205 808 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 CXCL9Q07325 125 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 TRIM14Q14142 442 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 EFCAB13Q8IY85 973 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 PI4KBQ9UBF8 816 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 SAR1BQ9Y6B6 198 aa19.15■□□□□ 0.66
SCAMP4-201ENST00000316097 ZC3H4Q9UPT8 1303 aaKnown RBP19.14■□□□□ 0.66
SCAMP4-201ENST00000316097 FOCADQ5VW36 1801 aa19.14■□□□□ 0.66
SCAMP4-201ENST00000316097 GGCXP38435 758 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 TGFB2P61812 414 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 TTBK2Q6IQ55 1244 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 ANKRD20A12PQ8NF67 263 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 DRC1Q96MC2 740 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 CRACR2AQ9BSW2 395 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 SWAP70Q9UH65 585 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 KCNJ18B7U540 433 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 TTLL1O95922 423 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 SLC16A2P36021 539 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 UBXN1Q04323 297 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 KCNJ12Q14500 433 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 RRP1BQ14684 758 aaKnown RBP19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 CERKLQ49MI3 558 aaPredicted RBP19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 CCDC125Q86Z20 511 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 NIM1KQ8IY84 436 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 GMLQ99445 158 aa19.14■□□□□ 0.65
SCAMP4-201ENST00000316097 ZNRF3Q9ULT6 936 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms