RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 E9PMD0 336 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 SSBP05455 408 aaKnown RBP eCLIP7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 POTEIP0CG38 1075 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 POTEJP0CG39 1038 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 PRCPP42785 496 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 ARHGAP4P98171 946 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 MYL5Q02045 173 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 STK4Q13043 487 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 LRRC41Q15345 812 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 NT5DC1Q5TFE4 455 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 FAM83AQ86UY5 434 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 IKZF4Q9H2S9 585 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 ARHGEF10LQ9HCE6 1279 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 GPRC5DQ9NZD1 345 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 LRWD1Q9UFC0 647 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 ZHX2Q9Y6X8 837 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 ZNF536O15090 1300 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 ESYT2A0FGR8 921 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 POTEFA5A3E0 1075 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 LONP1P36776 959 aaKnown RBP7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 CCT6AP40227 531 aaKnown RBP7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 KMT5BQ4FZB7 885 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 CEP135Q66GS9 1140 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 POTEGQ6S5H5 508 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 POTEEQ6S8J3 1075 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 IGSF22Q8N9C0 903 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 SPON1Q9HCB6 807 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 DDX39AO00148 427 aaKnown RBP7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 KLRC4O43908 158 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 SERPINC1P01008 464 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 RPN1P04843 607 aaKnown RBP7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 VCAM1P19320 739 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 SMARCA1P28370 1054 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 ARL6IP4Q66PJ3 421 aaKnown RBP7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 ARMCX5Q6P1M9 558 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 TSC1Q92574 1164 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 WDR18Q9BV38 432 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 RGL1Q9NZL6 768 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 MYMKA6NI61 221 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 FLOT1O75955 427 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 ECM2O94769 699 aaPredicted RBP7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 MRPL12P52815 198 aaKnown RBP7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 GALNT17Q6IS24 598 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 LDHDQ86WU2 507 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 SNX29Q8TEQ0 813 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 NAT10Q9H0A0 1025 aaKnown RBP7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 SLC39A2Q9NP94 309 aa7.89□□□□□ -1.15
LYSMD3-201ENST00000315948 SSC5DA1L4H1 1573 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 EML1O00423 815 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 MARCH6O60337 910 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 CLCN1P35523 988 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 TRMT1Q9NXH9 659 aaKnown RBP7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 ABCB11O95342 1321 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 MED24O75448 989 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 ASNSP08243 561 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 ALAS1P13196 640 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 ATG4CQ96DT6 458 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 HOOK2Q96ED9 719 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 CLMNQ96JQ2 1002 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 TMEM150BA6NC51 233 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 UBASH3AP57075 661 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 CPLX3Q8WVH0 158 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 CRYGNQ8WXF5 182 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 RPAP3Q9H6T3 665 aaPredicted RBP7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 GOPCQ9HD26 462 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 BMP2KQ9NSY1 1161 aaPredicted RBP7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 PCDHA12Q9UN75 941 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 KIAA1024Q9UPX6 916 aa7.88□□□□□ -1.15
LYSMD3-201ENST00000315948 H7C1D1 291 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 RNF225M0QZC1 329 aaPredicted RBP7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 MSH4O15457 936 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 BMP15O95972 392 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 IDEP14735 1019 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 LMNB1P20700 586 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 ASIC1P78348 528 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 GRIPAP1Q4V328 841 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 C9orf131Q5VYM1 1079 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 NCAPH2Q6IBW4 605 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 TRIM9Q9C026 710 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 ARP10275 920 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 ADKP55263 362 aaKnown RBP7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 SARM1Q6SZW1 724 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 APTXQ7Z2E3 356 aaKnown RBP7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 PIGOQ8TEQ8 1089 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 KBTBD4Q9NVX7 518 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 WRAP73Q9P2S5 460 aaPredicted RBP7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 CCPG1Q9ULG6 757 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 SYNRGQ9UMZ2 1314 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 A0A0U1RQJ8 604 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 SPDYE3A6NKU9 549 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 SFI1A8K8P3 1242 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 ZNF18P17022 549 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 PTPRAP18433 802 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 CDK11BP21127 795 aaKnown RBP7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 SPIRE1Q08AE8 756 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 FSTL1Q12841 308 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 BTNL9Q6UXG8 535 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 KIAA0895Q8NCT3 520 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 ETNPPLQ8TBG4 499 aa7.87□□□□□ -1.15
LYSMD3-201ENST00000315948 ATRIPQ8WXE1 791 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms