RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 ZNF827Q17R98 1081 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 THNSL1Q8IYQ7 743 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 GCNAQ96QF7 691 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 MYO3AQ8NEV4 1616 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 GNAT1P11488 350 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 TTBK2Q6IQ55 1244 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 SWSAP1Q6NVH7 229 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 CYFIP1Q7L576 1253 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 LSM14BQ9BX40 385 aaKnown RBP9.94□□□□□ -0.82
CTC1-201ENST00000315684 TXNDC16Q9P2K2 825 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 ANKRD36BP1Q96IX9 119 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 PLEKHA4Q9H4M7 779 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 GPR108Q9NPR9 543 aa9.94□□□□□ -0.82
CTC1-201ENST00000315684 NCAPD2Q15021 1401 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 LACTBP83111 547 aaPredicted RBP9.93□□□□□ -0.82
CTC1-201ENST00000315684 TMEM47Q9BQJ4 181 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 SH2D3AQ9BRG2 576 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 DCP1AQ9NPI6 582 aaPredicted RBP9.93□□□□□ -0.82
CTC1-201ENST00000315684 POLLQ9UGP5 575 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 LUC7L2Q9Y383 392 aaKnown RBP9.93□□□□□ -0.82
CTC1-201ENST00000315684 CD58P19256 250 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 ABCB4P21439 1286 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 PSMB7Q99436 277 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 PNMA2Q9UL42 364 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 TXNP10599 105 aaKnown RBP9.93□□□□□ -0.82
CTC1-201ENST00000315684 CETPP11597 493 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 FCGRTP55899 365 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 KIF5AQ12840 1032 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 SNW1Q13573 536 aaKnown RBP9.93□□□□□ -0.82
CTC1-201ENST00000315684 CTR9Q6PD62 1173 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 SYMPKQ92797 1274 aaKnown RBP9.93□□□□□ -0.82
CTC1-201ENST00000315684 FAM204AQ9H8W3 233 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 TRIM17Q9Y577 477 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 BFSP1Q12934 665 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 CASC4Q6P4E1 433 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 APOA5Q6Q788 366 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 NAA15Q9BXJ9 866 aaKnown RBP9.93□□□□□ -0.82
CTC1-201ENST00000315684 CPS1P31327 1500 aa9.93□□□□□ -0.82
CTC1-201ENST00000315684 NTSR2O95665 410 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 ADGRF4Q8IZF3 695 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 STRBPQ96SI9 672 aaKnown RBP9.92□□□□□ -0.82
CTC1-201ENST00000315684 ACAD9Q9H845 621 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 CDHR1Q96JP9 859 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 STIM2Q9P246 746 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 CTTNBP2NLQ9P2B4 639 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 HESX1Q9UBX0 185 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 ATP11BQ9Y2G3 1177 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 PCDHB4Q9Y5E5 795 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 PEX3P56589 373 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 SCN4BQ8IWT1 228 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 ZNF34Q8IZ26 560 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 FAM149B1Q96BN6 582 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 OPTNQ96CV9 577 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 SNX16P57768 344 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 KRT81Q14533 505 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 C1orf228Q6PIY5 440 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 SND1Q7KZF4 910 aaKnown RBP eCLIP9.92□□□□□ -0.821e-6■■□□□ 13
CTC1-201ENST00000315684 ANKRD13AQ8IZ07 590 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 MYOCDQ8IZQ8 938 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 MYZAPP0CAP1 466 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 TBC1D10CQ8IV04 446 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 KIF18AQ8NI77 898 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 DCAF4Q8WV16 495 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 PRMT6Q96LA8 375 aaPredicted RBP9.92□□□□□ -0.82
CTC1-201ENST00000315684 LARSQ9P2J5 1176 aaKnown RBP9.92□□□□□ -0.82
CTC1-201ENST00000315684 ZNF853P0CG23 659 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 RARBP10826 455 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 GSDMDP57764 484 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 GEN1Q17RS7 908 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 RCSD1Q6JBY9 416 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 GSDMBQ8TAX9 411 aa9.92□□□□□ -0.82
CTC1-201ENST00000315684 UNC13BO14795 1591 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 TRPM1Q7Z4N2 1603 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 NEXMIFQ5QGS0 1516 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 FAM160A1Q05DH4 1040 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 ZNF274Q96GC6 653 aaPredicted RBP9.91□□□□□ -0.82
CTC1-201ENST00000315684 NACC1Q96RE7 527 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 KCNQ5Q9NR82 932 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 C1orf112Q9NSG2 853 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 CNTNAP4Q9C0A0 1308 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 GADD45BO75293 160 aaPredicted RBP9.91□□□□□ -0.82
CTC1-201ENST00000315684 TACC1O75410 805 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 BCRP11274 1271 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 NBPF12Q5TAG4 269 aaPredicted RBP9.91□□□□□ -0.82
CTC1-201ENST00000315684 RASEFQ8IZ41 740 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 NME8Q8N427 588 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 GJB4Q9NTQ9 266 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 MTUS1Q9ULD2 1270 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 DPYSL4O14531 572 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 CYB5R4Q7L1T6 521 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 CCDC186Q7Z3E2 898 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 NSUN6Q8TEA1 469 aaKnown RBP9.91□□□□□ -0.82
CTC1-201ENST00000315684 IPO4Q8TEX9 1081 aaKnown RBP9.91□□□□□ -0.82
CTC1-201ENST00000315684 SKA2Q8WVK7 121 aaPredicted RBP9.91□□□□□ -0.82
CTC1-201ENST00000315684 NUDT12Q9BQG2 462 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 IRAK4Q9NWZ3 460 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 FBXO40Q9UH90 709 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 MOSPD1Q9UJG1 213 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 URGCPQ8TCY9 931 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 CSRNP2Q9H175 543 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms