RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 FRMPD4Q14CM0 1322 aa16.94■□□□□ 0.3
PPP1CA-201ENST00000312989 KIAA0355O15063 1070 aa16.94■□□□□ 0.3
PPP1CA-201ENST00000312989 PDE4DQ08499 809 aa16.94■□□□□ 0.3
PPP1CA-201ENST00000312989 FUT2Q10981 343 aa16.94■□□□□ 0.3
PPP1CA-201ENST00000312989 CXCL17Q6UXB2 119 aa16.94■□□□□ 0.3
PPP1CA-201ENST00000312989 FAM126BQ8IXS8 530 aa16.94■□□□□ 0.3
PPP1CA-201ENST00000312989 CMTR1Q8N1G2 835 aaKnown RBP16.94■□□□□ 0.3
PPP1CA-201ENST00000312989 IL31RAQ8NI17 732 aa16.94■□□□□ 0.3
PPP1CA-201ENST00000312989 GLT1D1Q96MS3 346 aa16.94■□□□□ 0.3
PPP1CA-201ENST00000312989 RMDN3Q96TC7 470 aa16.94■□□□□ 0.3
PPP1CA-201ENST00000312989 PQBP1O60828 265 aaKnown RBP16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 CFBP00751 764 aa16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 CLTBP09497 229 aa16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 HOXA13P31271 388 aaPredicted RBP16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 RNF20Q5VTR2 975 aa16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 APOA5Q6Q788 366 aa16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 TMTC3Q6ZXV5 915 aa16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 DHX32Q7L7V1 743 aaKnown RBP16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 TMTC2Q8N394 836 aa16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 NSUN6Q8TEA1 469 aaKnown RBP16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 IWS1Q96ST2 819 aa16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 PDCD2LQ9BRP1 358 aa16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 SPC25Q9HBM1 224 aa16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 MAP3K20Q9NYL2 800 aaKnown RBP16.93■□□□□ 0.3
PPP1CA-201ENST00000312989 ARVCFO00192 962 aa16.92■□□□□ 0.3
PPP1CA-201ENST00000312989 CD4P01730 458 aa16.92■□□□□ 0.3
PPP1CA-201ENST00000312989 CPA1P15085 419 aa16.92■□□□□ 0.3
PPP1CA-201ENST00000312989 EIF2AK2P19525 551 aaKnown RBP16.92■□□□□ 0.3
PPP1CA-201ENST00000312989 ERICH6BQ5W0A0 696 aa16.92■□□□□ 0.3
PPP1CA-201ENST00000312989 TDHQ8IZJ6 230 aa16.92■□□□□ 0.3
PPP1CA-201ENST00000312989 CTCFLQ8NI51 663 aaPredicted RBP16.92■□□□□ 0.3
PPP1CA-201ENST00000312989 SCFD2Q8WU76 684 aa16.92■□□□□ 0.3
PPP1CA-201ENST00000312989 FAM217BQ9NTX9 383 aaPredicted RBP16.92■□□□□ 0.3
PPP1CA-201ENST00000312989 PPP4R2Q9NY27 417 aa16.92■□□□□ 0.3
PPP1CA-201ENST00000312989 SNX14Q9Y5W7 946 aa16.92■□□□□ 0.3
PPP1CA-201ENST00000312989 A0A0U1RQG5 324 aaPredicted RBP16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 CCDC69A6NI79 296 aa16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 A6NJR5 290 aa16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 NEFLP07196 543 aa16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 NR3C2P08235 984 aa16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 KIF5BP33176 963 aa16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 EPHB4P54760 987 aa16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 PURAQ00577 322 aaKnown RBP16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 LRIT3Q3SXY7 679 aa16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 NOL8Q76FK4 1167 aaKnown RBP16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 SAMD3Q8N6K7 520 aa16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 FANCBQ8NB91 859 aa16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 BADQ92934 168 aa16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 UBE2OQ9C0C9 1292 aaKnown RBP16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 PRDM5Q9NQX1 630 aaPredicted RBP16.91■□□□□ 0.3
PPP1CA-201ENST00000312989 MEIS2O14770 477 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 PSMC6P62333 389 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 ARHGAP1Q07960 439 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 PGM5Q15124 567 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 PPP2R5BQ15173 497 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 NFXL1Q6ZNB6 911 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 VSIG10LQ86VR7 867 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 PIBF1Q8WXW3 757 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 LRCH3Q96II8 777 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 LZTS2Q9BRK4 669 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 AGXT2Q9BYV1 514 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 AP5M1Q9H0R1 490 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 SLC12A7Q9Y666 1083 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 CNTNAP5Q8WYK1 1306 aa16.9■□□□□ 0.3
PPP1CA-201ENST00000312989 NKRFO15226 690 aaKnown RBP eCLIP16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 EIF3JO75822 258 aaKnown RBP16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 CABYRO75952 493 aa16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 CALM1P0DP23 149 aa16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 CALM2P0DP24 149 aa16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 CALM3P0DP25 149 aa16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 TXNP10599 105 aaKnown RBP16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 STXBP2Q15833 593 aa16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 C9orf50Q5SZB4 431 aa16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 ARHGEF16Q5VV41 709 aa16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 TYW1BQ6NUM6 668 aa16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 MICU3Q86XE3 530 aa16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 OR6J1Q8NGC5 347 aa16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 DDX41Q9UJV9 622 aaKnown RBP16.89■□□□□ 0.3
PPP1CA-201ENST00000312989 NID2Q14112 1375 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 hCG_1642624A0A1W2PR95 340 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 GCOM1H8Y6P7 765 aaPredicted RBP16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 PIK3CDO00329 1044 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 POLR2MP0CAP2 368 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 CDC27P30260 824 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 GNAQP50148 359 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 MRPS9P82933 396 aaKnown RBP16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 ITGA7Q13683 1181 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 KRT32Q14532 448 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 TTLL4Q14679 1199 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 LY6KQ17RY6 165 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 SEPT14Q6ZU15 432 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 FBXL16Q8N461 479 aa16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 GPKOWQ92917 476 aaPredicted RBP eCLIP16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 RRP36Q96EU6 259 aaKnown RBP16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 MPHOSPH6Q99547 160 aaKnown RBP16.89■□□□□ 0.29
PPP1CA-201ENST00000312989 EPB41L2O43491 1005 aaKnown RBP16.88■□□□□ 0.29
PPP1CA-201ENST00000312989 SEMA3FQ13275 785 aa16.88■□□□□ 0.29
PPP1CA-201ENST00000312989 EMID1Q96A84 441 aaPredicted RBP16.88■□□□□ 0.29
PPP1CA-201ENST00000312989 VWCEQ96DN2 955 aa16.88■□□□□ 0.29
PPP1CA-201ENST00000312989 ZFP91Q96JP5 570 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms