RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 C12orf42Q96LP6 360 aa18.85■□□□□ 0.61
CLCF1-201ENST00000312438 KCNMB3Q9NPA1 279 aa18.85■□□□□ 0.61
CLCF1-201ENST00000312438 KBTBD4Q9NVX7 518 aa18.85■□□□□ 0.61
CLCF1-201ENST00000312438 CCPG1Q9ULG6 757 aa18.85■□□□□ 0.61
CLCF1-201ENST00000312438 PPP1R9AQ9ULJ8 1098 aa18.85■□□□□ 0.61
CLCF1-201ENST00000312438 ZNF536O15090 1300 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 TBX3O15119 743 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 PLCG1P19174 1290 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 CASP1P29466 404 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 ZNF75DP51815 510 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 MYL5Q02045 173 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 KRT79Q5XKE5 535 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 FCHSD1Q86WN1 690 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 TBC1D5Q92609 795 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 AGBL1Q96MI9 1066 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 PLIN2Q99541 437 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 SLC38A10Q9HBR0 1119 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 DGKZQ13574 1117 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 CUL4BQ13620 913 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 USP50Q70EL3 339 aaPredicted RBP18.84■□□□□ 0.61
CLCF1-201ENST00000312438 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.84■□□□□ 0.61
CLCF1-201ENST00000312438 BLZF1Q9H2G9 400 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 EHMT1Q9H9B1 1298 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 RMND1Q9NWS8 449 aa18.84■□□□□ 0.61
CLCF1-201ENST00000312438 CTDP1Q9Y5B0 961 aaPredicted RBP18.84■□□□□ 0.61
CLCF1-201ENST00000312438 SBF1O95248 1867 aa18.83■□□□□ 0.61
CLCF1-201ENST00000312438 PPP1R12BO60237 982 aaPredicted RBP18.83■□□□□ 0.6
CLCF1-201ENST00000312438 ZBED4O75132 1171 aa18.83■□□□□ 0.6
CLCF1-201ENST00000312438 ERCC5P28715 1186 aaPredicted RBP18.83■□□□□ 0.6
CLCF1-201ENST00000312438 MAP3K9P80192 1104 aa18.83■□□□□ 0.6
CLCF1-201ENST00000312438 AMPD3Q01432 767 aa18.83■□□□□ 0.6
CLCF1-201ENST00000312438 SEMA3FQ13275 785 aa18.83■□□□□ 0.6
CLCF1-201ENST00000312438 GPR162Q16538 588 aa18.83■□□□□ 0.6
CLCF1-201ENST00000312438 MCF2L2Q86YR7 1114 aa18.83■□□□□ 0.6
CLCF1-201ENST00000312438 ZC3H15Q8WU90 426 aaKnown RBP18.83■□□□□ 0.6
CLCF1-201ENST00000312438 ZNF76P36508 570 aa18.82■□□□□ 0.6
CLCF1-201ENST00000312438 PRKG1Q13976 671 aa18.82■□□□□ 0.6
CLCF1-201ENST00000312438 PRR16Q569H4 304 aa18.82■□□□□ 0.6
CLCF1-201ENST00000312438 SAMD3Q8N6K7 520 aa18.82■□□□□ 0.6
CLCF1-201ENST00000312438 ENOX1Q8TC92 643 aaKnown RBP18.82■□□□□ 0.6
CLCF1-201ENST00000312438 FAM20AQ96MK3 541 aa18.82■□□□□ 0.6
CLCF1-201ENST00000312438 AFG3L2Q9Y4W6 797 aa18.82■□□□□ 0.6
CLCF1-201ENST00000312438 SSC5DA1L4H1 1573 aa18.82■□□□□ 0.6
CLCF1-201ENST00000312438 POTEMA6NI47 508 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 GOLGA6L6A8MZA4 724 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 RPN1P04843 607 aaKnown RBP18.81■□□□□ 0.6
CLCF1-201ENST00000312438 ILDR2Q71H61 639 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 KRT26Q7Z3Y9 468 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 CPXCR1Q8N123 301 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 MRFAP1L1Q96HT8 127 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 CDK5RAP3Q96JB5 506 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 MAP3K20Q9NYL2 800 aaKnown RBP18.81■□□□□ 0.6
CLCF1-201ENST00000312438 TMOD4Q9NZQ9 345 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 STK17AQ9UEE5 414 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 ZC3H4Q9UPT8 1303 aaKnown RBP18.81■□□□□ 0.6
CLCF1-201ENST00000312438 FAM86B1E9PN63 330 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 SLC26A4O43511 780 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 GRIN3BO60391 1043 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 FAM86B2P0C5J1 330 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 HSD17B4P51659 736 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 HMGCS2P54868 508 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 GRB10Q13322 594 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.81■□□□□ 0.6
CLCF1-201ENST00000312438 ETNPPLQ8TBG4 499 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 RBM46Q8TBY0 533 aaKnown RBP18.81■□□□□ 0.6
CLCF1-201ENST00000312438 SNX29Q8TEQ0 813 aa18.81■□□□□ 0.6
CLCF1-201ENST00000312438 RAVER2Q9HCJ3 691 aaKnown RBP18.81■□□□□ 0.6
CLCF1-201ENST00000312438 GLTPD2A6NH11 291 aa18.8■□□□□ 0.6
CLCF1-201ENST00000312438 ESPNB1AK53 854 aa18.8■□□□□ 0.6
CLCF1-201ENST00000312438 ADM5C9JUS6 153 aa18.8■□□□□ 0.6
CLCF1-201ENST00000312438 VWA5AO00534 786 aa18.8■□□□□ 0.6
CLCF1-201ENST00000312438 CDC25BP30305 580 aa18.8■□□□□ 0.6
CLCF1-201ENST00000312438 EPHX2P34913 555 aa18.8■□□□□ 0.6
CLCF1-201ENST00000312438 CLEC4DQ8WXI8 215 aa18.8■□□□□ 0.6
CLCF1-201ENST00000312438 LENG9Q96B70 501 aa18.8■□□□□ 0.6
CLCF1-201ENST00000312438 PNMA5Q96PV4 448 aa18.8■□□□□ 0.6
CLCF1-201ENST00000312438 RABGAP1Q9Y3P9 1069 aa18.8■□□□□ 0.6
CLCF1-201ENST00000312438 TPM3P06753 285 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 ALAS1P13196 640 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 GHRHRQ02643 423 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 KCNB1Q14721 858 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 COG2Q14746 738 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 SH3D19Q5HYK7 790 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 SV2BQ7L1I2 683 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 ZSCAN30Q86W11 494 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 LRRC15Q8TF66 581 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 GJA10Q969M2 543 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 C7orf25Q9BPX7 421 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 STK24Q9Y6E0 443 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 IREB2P48200 963 aaKnown RBP18.79■□□□□ 0.6
CLCF1-201ENST00000312438 VGLL4Q14135 290 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 HYIQ5T013 277 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 ZNF658Q5TYW1 1059 aaPredicted RBP18.79■□□□□ 0.6
CLCF1-201ENST00000312438 DLK2Q6UY11 383 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 DRC7Q8IY82 874 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 NUDT12Q9BQG2 462 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 LRRC27Q9C0I9 530 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 NT5C3AQ9H0P0 336 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 HSD3B7Q9H2F3 369 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 CSADQ9Y600 493 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms