RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 KIF9Q9HAQ2 790 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 PLAAQ9Y263 795 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 A0A1W2PQC6 194 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 BUB1BO60566 1050 aaPredicted RBP19.96■□□□□ 0.79
SPSB4-201ENST00000310546 CTDSPL2Q05D32 466 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 ZNF658Q5TYW1 1059 aaPredicted RBP19.96■□□□□ 0.79
SPSB4-201ENST00000310546 TYW1BQ6NUM6 668 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 ZNF507Q8TCN5 953 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 ZNF483Q8TF39 744 aaPredicted RBP19.96■□□□□ 0.79
SPSB4-201ENST00000310546 MAGEC2Q9UBF1 373 aaPredicted RBP19.96■□□□□ 0.79
SPSB4-201ENST00000310546 LEMD3Q9Y2U8 911 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 MYO5AQ9Y4I1 1855 aaKnown RBP19.96■□□□□ 0.79
SPSB4-201ENST00000310546 PCCAP05165 728 aaPredicted RBP19.96■□□□□ 0.79
SPSB4-201ENST00000310546 SF3A3Q12874 501 aaKnown RBP eCLIP19.96■□□□□ 0.79
SPSB4-201ENST00000310546 MYO1EQ12965 1108 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 MSL1Q68DK7 614 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 ARMC2Q8NEN0 867 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 MAGEC3Q8TD91 643 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 SEC16BQ96JE7 1060 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 TRIM47Q96LD4 638 aa19.96■□□□□ 0.79
SPSB4-201ENST00000310546 IDH1O75874 414 aaKnown RBP19.95■□□□□ 0.78
SPSB4-201ENST00000310546 GLE1Q53GS7 698 aaKnown RBP19.95■□□□□ 0.78
SPSB4-201ENST00000310546 HIBCHQ6NVY1 386 aaPredicted RBP19.95■□□□□ 0.78
SPSB4-201ENST00000310546 ZNF572Q7Z3I7 529 aaPredicted RBP19.95■□□□□ 0.78
SPSB4-201ENST00000310546 SEPT12Q8IYM1 358 aa19.95■□□□□ 0.78
SPSB4-201ENST00000310546 ALS2CR12Q96Q35 445 aa19.95■□□□□ 0.78
SPSB4-201ENST00000310546 EME2A4GXA9 379 aaPredicted RBP19.95■□□□□ 0.78
SPSB4-201ENST00000310546 RNASE9P60153 205 aaKnown RBP19.95■□□□□ 0.78
SPSB4-201ENST00000310546 PPP4R3AQ6IN85 833 aa19.95■□□□□ 0.78
SPSB4-201ENST00000310546 CACNA2D3Q8IZS8 1091 aa19.95■□□□□ 0.78
SPSB4-201ENST00000310546 CRACR2BQ8N4Y2 399 aaPredicted RBP19.95■□□□□ 0.78
SPSB4-201ENST00000310546 OR2W6PQ8NHA6 318 aa19.95■□□□□ 0.78
SPSB4-201ENST00000310546 NSMCE1Q8WV22 266 aa19.95■□□□□ 0.78
SPSB4-201ENST00000310546 SH2D4AQ9H788 454 aa19.95■□□□□ 0.78
SPSB4-201ENST00000310546 IQSEC3Q9UPP2 1182 aaPredicted RBP19.95■□□□□ 0.78
SPSB4-201ENST00000310546 RPN1P04843 607 aaKnown RBP19.94■□□□□ 0.78
SPSB4-201ENST00000310546 PPP1R7Q15435 360 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 METTL24Q5JXM2 366 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 EMC10Q5UCC4 262 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 STAMBPL1Q96FJ0 436 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 RBM28Q9NW13 759 aaKnown RBP19.94■□□□□ 0.78
SPSB4-201ENST00000310546 GNPATO15228 680 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 CDC25CP30307 473 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 LIFRP42702 1097 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 DNM2P50570 870 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 INHBEP58166 350 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 FERMT2Q96AC1 680 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.94■□□□□ 0.78
SPSB4-201ENST00000310546 NOD2Q9HC29 1040 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 PCDHA13Q9Y5I0 950 aa19.94■□□□□ 0.78
SPSB4-201ENST00000310546 NUP98P52948 1817 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 TNFRSF8P28908 595 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 ZBED6P86452 979 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 IFFO1Q0D2I5 559 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 PTGDRQ13258 359 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 ARFGAP2Q8N6H7 521 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 HVCN1Q96D96 273 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 GCOM1H8Y6P7 765 aaPredicted RBP19.93■□□□□ 0.78
SPSB4-201ENST00000310546 ONECUT3O60422 494 aaPredicted RBP19.93■□□□□ 0.78
SPSB4-201ENST00000310546 PRDM1O75626 825 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 MYZAPP0CAP1 466 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 PRLRP16471 622 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 GRIK3Q13003 919 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.93■□□□□ 0.78
SPSB4-201ENST00000310546 TUBGCP2Q9BSJ2 902 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 SPATS2LQ9NUQ6 558 aaKnown RBP19.93■□□□□ 0.78
SPSB4-201ENST00000310546 EXOC1Q9NV70 894 aa19.93■□□□□ 0.78
SPSB4-201ENST00000310546 PDS5AQ29RF7 1337 aaKnown RBP19.93■□□□□ 0.78
SPSB4-201ENST00000310546 TRAPPC3O43617 180 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 BUB1O43683 1085 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 ATP6V1G2O95670 118 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 XRCC4Q13426 336 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 HLTFQ14527 1009 aaKnown RBP eCLIP19.92■□□□□ 0.78
SPSB4-201ENST00000310546 C2CD5Q86YS7 1000 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 GDF3Q9NR23 364 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 RASSF10A6NK89 507 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 GTPBP6O43824 516 aaPredicted RBP19.92■□□□□ 0.78
SPSB4-201ENST00000310546 CFAP221Q4G0U5 840 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 POTEAQ6S8J7 498 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 CPLX4Q7Z7G2 160 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 TCP11Q8WWU5 503 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 KRT12Q99456 494 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 PHF20L1A8MW92 1017 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 MGRN1O60291 552 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 CAMTA2O94983 1202 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 EEF1GP26641 437 aaKnown RBP19.92■□□□□ 0.78
SPSB4-201ENST00000310546 SLC8A3P57103 927 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 SLC51AQ86UW1 340 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 PNMA8AQ86V59 439 aaPredicted RBP19.92■□□□□ 0.78
SPSB4-201ENST00000310546 CD302Q8IX05 232 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 TTYH3Q9C0H2 523 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 CCNL1Q9UK58 526 aaPredicted RBP19.92■□□□□ 0.78
SPSB4-201ENST00000310546 L3MBTL1Q9Y468 752 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 MYH13Q9UKX3 1938 aa19.92■□□□□ 0.78
SPSB4-201ENST00000310546 ECM29Q5VYK3 1845 aa19.91■□□□□ 0.78
SPSB4-201ENST00000310546 ENO4A6NNW6 628 aa19.91■□□□□ 0.78
SPSB4-201ENST00000310546 AKR1B10O60218 316 aa19.91■□□□□ 0.78
SPSB4-201ENST00000310546 CIAO1O76071 339 aa19.91■□□□□ 0.78
SPSB4-201ENST00000310546 CLTAP09496 248 aa19.91■□□□□ 0.78
SPSB4-201ENST00000310546 SRGNP10124 158 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms