RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 APOBEC3HQ6NTF7 200 aaKnown RBP12.89□□□□□ -0.35
PTPN2-201ENST00000309660 GOLGA1Q92805 767 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 RHOXF2Q9BQY4 288 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 THAP9Q9H5L6 903 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 MMRN2Q9H8L6 949 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 ALDH1B1P30837 517 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 DNM2P50570 870 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 MRPL12P52815 198 aaKnown RBP12.89□□□□□ -0.35
PTPN2-201ENST00000309660 CUEDC2Q9H467 287 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 PCDHA1Q9Y5I3 950 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 TAF1LQ8IZX4 1826 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 POLR3GO15318 223 aaPredicted RBP12.89□□□□□ -0.35
PTPN2-201ENST00000309660 MYL1P05976 194 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 EEF2P13639 858 aaKnown RBP12.89□□□□□ -0.35
PTPN2-201ENST00000309660 CYP27A1Q02318 531 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 CCDC122Q5T0U0 273 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 FKBP15Q5T1M5 1219 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 BLOC1S4Q9NUP1 217 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 PCDHA12Q9UN75 941 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 DDTLA6NHG4 134 aaPredicted RBP12.88□□□□□ -0.35
PTPN2-201ENST00000309660 SEPT2Q15019 361 aa12.88□□□□□ -0.35
PTPN2-201ENST00000309660 CERKLQ49MI3 558 aaPredicted RBP12.88□□□□□ -0.35
PTPN2-201ENST00000309660 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
PTPN2-201ENST00000309660 DDX12PQ92771 950 aa12.88□□□□□ -0.35
PTPN2-201ENST00000309660 PNMA5Q96PV4 448 aa12.88□□□□□ -0.35
PTPN2-201ENST00000309660 MYH8P13535 1937 aa12.88□□□□□ -0.35
PTPN2-201ENST00000309660 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
PTPN2-201ENST00000309660 KRT18P05783 430 aaKnown RBP12.88□□□□□ -0.35
PTPN2-201ENST00000309660 NELFCDQ8IXH7 590 aa12.88□□□□□ -0.35
PTPN2-201ENST00000309660 C7orf25Q9BPX7 421 aa12.88□□□□□ -0.35
PTPN2-201ENST00000309660 PARD6BQ9BYG5 372 aa12.88□□□□□ -0.35
PTPN2-201ENST00000309660 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
PTPN2-201ENST00000309660 DDX60LQ5H9U9 1706 aaKnown RBP12.88□□□□□ -0.35
PTPN2-201ENST00000309660 MACROD2A1Z1Q3 448 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 ZBTB5O15062 677 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 PNMA6AP0CW24 399 aaPredicted RBP12.87□□□□□ -0.35
PTPN2-201ENST00000309660 QRICH1Q2TAL8 776 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 SLFN13Q68D06 897 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 NAPGQ99747 312 aaPredicted RBP12.87□□□□□ -0.35
PTPN2-201ENST00000309660 SEMA6BQ9H3T3 888 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 ESYT2A0FGR8 921 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 CHRNA5P30532 468 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 PDE6BP35913 854 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 NCAPH2Q6IBW4 605 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 C2CD5Q86YS7 1000 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 FAM114A1Q8IWE2 563 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 CAPZA3Q96KX2 299 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 DRC1Q96MC2 740 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 MAGEF1Q9HAY2 307 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 POLD4Q9HCU8 107 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 CDC23Q9UJX2 597 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 MYH1P12882 1939 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 E9PMD0 336 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 STAT3P40763 770 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 ENOX2Q16206 610 aaKnown RBP12.87□□□□□ -0.35
PTPN2-201ENST00000309660 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
PTPN2-201ENST00000309660 TMC4Q7Z404 712 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 TDRD3Q9H7E2 651 aaKnown RBP12.87□□□□□ -0.35
PTPN2-201ENST00000309660 RIC8AQ9NPQ8 531 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 HDAC6Q9UBN7 1215 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 KIAA1024Q9UPX6 916 aa12.87□□□□□ -0.35
PTPN2-201ENST00000309660 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 SMARCA1P28370 1054 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 ECM1Q16610 540 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 DNAJC18Q9H819 358 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 ICA1Q05084 483 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 CDC37Q16543 378 aaPredicted RBP12.86□□□□□ -0.35
PTPN2-201ENST00000309660 SRGAP1Q7Z6B7 1085 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 CCDC155Q8N6L0 562 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 GPR161Q8N6U8 529 aaKnown RBP12.86□□□□□ -0.35
PTPN2-201ENST00000309660 ZNF507Q8TCN5 953 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 MASTLQ96GX5 879 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 DEF6Q9H4E7 631 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 NPHP3-ACAD11A0A0J9YXS1 232 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 POTECB2RU33 542 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 TULP1O00294 542 aaPredicted RBP12.86□□□□□ -0.35
PTPN2-201ENST00000309660 EDIL3O43854 480 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 ARHGAP25P42331 645 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 KRT26Q7Z3Y9 468 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
PTPN2-201ENST00000309660 RAD54LQ92698 747 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 CAPN11Q9UMQ6 739 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 REXO2Q9Y3B8 237 aaKnown RBP12.86□□□□□ -0.35
PTPN2-201ENST00000309660 FHOD1Q9Y613 1164 aa12.86□□□□□ -0.35
PTPN2-201ENST00000309660 TRAF5O00463 557 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 SRGAP2O75044 1071 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 PLEKP08567 350 aaPredicted RBP12.85□□□□□ -0.35
PTPN2-201ENST00000309660 SNHG28P0DPA3 235 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 AOC3Q16853 763 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 PRR16Q569H4 304 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 WDR59Q6PJI9 974 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 UNC13DQ70J99 1090 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
PTPN2-201ENST00000309660 STK17AQ9UEE5 414 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 hCG_1984214I3L0E3 225 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 659.6 ms