RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 RPAINQ86UA6 219 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 MICU3Q86XE3 530 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 CTCFLQ8NI51 663 aaPredicted RBP9.46□□□□□ -0.89
CHD6-201ENST00000309279 NUP133Q8WUM0 1156 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 MTMR8Q96EF0 704 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 LZTS2Q9BRK4 669 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 RANBP17Q9H2T7 1088 aaKnown RBP9.46□□□□□ -0.89
CHD6-201ENST00000309279 RIOX1Q9H6W3 641 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 IFT122Q9HBG6 1241 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 FAM217BQ9NTX9 383 aaPredicted RBP9.46□□□□□ -0.89
CHD6-201ENST00000309279 HPS5Q9UPZ3 1129 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 ZNF536O15090 1300 aa9.46□□□□□ -0.9
CHD6-201ENST00000309279 HTTP42858 3142 aa9.46□□□□□ -0.9
CHD6-201ENST00000309279 CYTH3O43739 400 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 FKTNO75072 461 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 ZBED4O75132 1171 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 RXRAP19793 462 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 PDIA3P30101 505 aaKnown RBP9.45□□□□□ -0.9
CHD6-201ENST00000309279 STAT3P40763 770 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 GNAQP50148 359 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 AK2P54819 239 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 CCNA1P78396 465 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 LACTBP83111 547 aaPredicted RBP9.45□□□□□ -0.9
CHD6-201ENST00000309279 RAD51AP2Q09MP3 1159 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 IKQ13123 557 aaPredicted RBP9.45□□□□□ -0.9
CHD6-201ENST00000309279 SLC35G1Q2M3R5 365 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 TTC39BQ5VTQ0 682 aaPredicted RBP9.45□□□□□ -0.9
CHD6-201ENST00000309279 CCDC174Q6PII3 467 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 DRC7Q8IY82 874 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 ADGRF4Q8IZF3 695 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 SVIPQ8NHG7 77 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 TINF2Q9BSI4 451 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 SPZ1Q9BXG8 430 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 SPATC1LQ9H0A9 340 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 CPVLQ9H3G5 476 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 RBM28Q9NW13 759 aaKnown RBP9.45□□□□□ -0.9
CHD6-201ENST00000309279 ISY1Q9ULR0 285 aaKnown RBP9.45□□□□□ -0.9
CHD6-201ENST00000309279 SYNRGQ9UMZ2 1314 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 CCDC196A0A1B0GTZ2 297 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 ICAM1P05362 532 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 FAM163BP0C2L3 166 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 CTGFP29279 349 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 GTF2F1P35269 517 aaKnown RBP eCLIP9.45□□□□□ -0.9
CHD6-201ENST00000309279 SSR1P43307 286 aaKnown RBP9.45□□□□□ -0.9
CHD6-201ENST00000309279 LBX1P52954 281 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 CAP1Q01518 475 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 POU5F1BQ06416 359 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 FUT2Q10981 343 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 UVSSAQ2YD98 709 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 ZNF746Q6NUN9 644 aaPredicted RBP9.45□□□□□ -0.9
CHD6-201ENST00000309279 TMTC3Q6ZXV5 915 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 RIOX2Q8IUF8 465 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 SRBD1Q8N5C6 995 aaKnown RBP9.45□□□□□ -0.9
CHD6-201ENST00000309279 SHCBP1Q8NEM2 672 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 SLC39A13Q96H72 371 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 MOV10L1Q9BXT6 1211 aaKnown RBP9.45□□□□□ -0.9
CHD6-201ENST00000309279 TEX13BQ9BXU2 312 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 ZSWIM4Q9H7M6 989 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 JMJD4Q9H9V9 463 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 TPCN1Q9ULQ1 816 aa9.45□□□□□ -0.9
CHD6-201ENST00000309279 GOLGA8BA8MQT2 603 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 PLEKHA8P1O95397 391 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 SLC25A27O95847 323 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 GNRH1P01148 92 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 CDC27P30260 824 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 MAPK4P31152 587 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 ADD1P35611 737 aaKnown RBP9.44□□□□□ -0.9
CHD6-201ENST00000309279 METAP2P50579 478 aaKnown RBP eCLIP9.44□□□□□ -0.9
CHD6-201ENST00000309279 ZKSCAN8Q15776 578 aaPredicted RBP9.44□□□□□ -0.9
CHD6-201ENST00000309279 NTRK3Q16288 839 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 RTN1Q16799 776 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 FILIP1Q7Z7B0 1213 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 RAB11FIP4Q86YS3 637 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 CCDC144CPQ8IYA2 1237 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 RSPH1Q8WYR4 309 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 ERO1AQ96HE7 468 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 LARP6Q9BRS8 491 aaKnown RBP9.44□□□□□ -0.9
CHD6-201ENST00000309279 MUC3BQ9H195 1237 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 PORCNQ9H237 461 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 MROH8Q9H579 483 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 CASS4Q9NQ75 786 aa9.44□□□□□ -0.9
CHD6-201ENST00000309279 ZNFX1Q9P2E3 1918 aaKnown RBP9.44□□□□□ -0.9
CHD6-201ENST00000309279 GOLGA8AA7E2F4 631 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 ZBTB5O15062 677 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 PFKFB2O60825 505 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 HSD3B2P26439 372 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 PSMC4P43686 418 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 SNAP25P60880 206 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 MAP2K5Q13163 448 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 PLS1Q14651 629 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 KIF22Q14807 665 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 ARHGEF6Q15052 776 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 SNRNP48Q6IEG0 339 aaKnown RBP9.43□□□□□ -0.9
CHD6-201ENST00000309279 CPXCR1Q8N123 301 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 CD99L2Q8TCZ2 262 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 ADAMTS19Q8TE59 1207 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 TRIM47Q96LD4 638 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 AGBL1Q96MI9 1066 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 ARHGAP39Q9C0H5 1083 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 EFCC1Q9HA90 598 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms