RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TXKP42681 527 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 CCDC121Q6ZUS5 278 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 STAG2Q8N3U4 1231 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 TTYH3Q9C0H2 523 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 EPHB6O15197 1021 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 OR52Z1P0C646 297 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
PTPN7-201ENST00000309017 ZNF662Q6ZS27 426 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 SV2BQ7L1I2 683 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 CEP57Q86XR8 500 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 ERGIC2Q96RQ1 377 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 TSG101Q99816 390 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 KBTBD4Q9NVX7 518 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 MYH10P35580 1976 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 GLI1P08151 1106 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 FAM153BP0C7A2 387 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 GOLGA8HP0CJ92 632 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 ATP6V1AP38606 617 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 RAPGEF1Q13905 1077 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 FAM153CQ494X1 144 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 SLC9C1Q4G0N8 1177 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 CADPS2Q86UW7 1296 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 DHX37Q8IY37 1157 aaKnown RBP12.32□□□□□ -0.44
PTPN7-201ENST00000309017 SH3GL2Q99962 352 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 FAM153AQ9UHL3 310 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 NAA35Q5VZE5 725 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 RIOK1Q9BRS2 568 aaKnown RBP12.32□□□□□ -0.44
PTPN7-201ENST00000309017 CCSER1Q9C0I3 900 aa12.32□□□□□ -0.44
PTPN7-201ENST00000309017 LAMB4A4D0S4 1761 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 RASSF10A6NK89 507 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 PPP1R37O75864 691 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 CYP19A1P11511 503 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-201ENST00000309017 PPP1R2P41236 205 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 TNNC1P63316 161 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 SF3B2Q13435 895 aaKnown RBP12.31□□□□□ -0.44
PTPN7-201ENST00000309017 LRRC41Q15345 812 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 MAN2A1Q16706 1144 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 PAXIP1Q6ZW49 1069 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-201ENST00000309017 MTMR8Q96EF0 704 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 PURBQ96QR8 312 aaKnown RBP12.31□□□□□ -0.44
PTPN7-201ENST00000309017 CARD10Q9BWT7 1032 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 CPVLQ9H3G5 476 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 TMCO5BA8MYB1 307 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 NKRFO15226 690 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTPN7-201ENST00000309017 PALMO75781 387 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 MIIPQ5JXC2 388 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 SPATS2Q86XZ4 545 aaKnown RBP12.31□□□□□ -0.44
PTPN7-201ENST00000309017 ZNF473Q8WTR7 871 aaKnown RBP12.31□□□□□ -0.44
PTPN7-201ENST00000309017 ZHX3Q9H4I2 956 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 TSKSQ9UJT2 592 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 WTIPA6NIX2 430 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-201ENST00000309017 TRAF5O00463 557 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 TSPY3P0CV98 308 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 TSPY8P0CW00 308 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 GNAQP50148 359 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 ARFGAP2Q8N6H7 521 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 CCDC155Q8N6L0 562 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 C4orf32Q8N8J7 132 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 IQCDQ96DY2 449 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 TLR10Q9BXR5 811 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 EPN3Q9H201 632 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 PLAAQ9Y263 795 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 KCPQ6ZWJ8 1503 aa12.31□□□□□ -0.44
PTPN7-201ENST00000309017 A0A1W2PQJ5 194 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 GCOM1H8Y6P7 765 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-201ENST00000309017 MYZAPP0CAP1 466 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 PCP11498 1178 aaKnown RBP12.3□□□□□ -0.44
PTPN7-201ENST00000309017 SF3A3Q12874 501 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTPN7-201ENST00000309017 NLRP14Q86W24 1093 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 UBLCP1Q8WVY7 318 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-201ENST00000309017 CCT8L2Q96SF2 557 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 CUEDC2Q9H467 287 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 PCDHA6Q9UN73 950 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 PCDHA8Q9Y5H6 950 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 MYH2Q9UKX2 1941 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 PRLRP16471 622 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 SKOR1P84550 965 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 HDLBPQ00341 1268 aaKnown RBP12.3□□□□□ -0.44
PTPN7-201ENST00000309017 NONOQ15233 471 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTPN7-201ENST00000309017 KIAA0753Q2KHM9 967 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 GLE1Q53GS7 698 aaKnown RBP12.3□□□□□ -0.44
PTPN7-201ENST00000309017 SFMBT2Q5VUG0 894 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 DZIP1Q86YF9 867 aaKnown RBP12.3□□□□□ -0.44
PTPN7-201ENST00000309017 ZNF444Q8N0Y2 327 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-201ENST00000309017 RUBCNQ92622 972 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 CAVIN3Q969G5 261 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 SCLT1Q96NL6 688 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 CXorf56Q9H5V9 222 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 KCNK3O14649 394 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 POLR2FP61218 127 aaKnown RBP12.3□□□□□ -0.44
PTPN7-201ENST00000309017 CDK17Q00537 523 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 KCNV1Q6PIU1 500 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 DCP1AQ9NPI6 582 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-201ENST00000309017 SALL4Q9UJQ4 1053 aa12.3□□□□□ -0.44
PTPN7-201ENST00000309017 KDM4FA0A1W2PPD8 638 aa12.29□□□□□ -0.44
PTPN7-201ENST00000309017 BACH1O14867 736 aa12.29□□□□□ -0.44
PTPN7-201ENST00000309017 ITIH3Q06033 890 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 195.8 ms