RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 DDAH1O94760 285 aa23.03■■□□□ 1.28
PDZRN3-202ENST00000308537 LIFRP42702 1097 aa23.03■■□□□ 1.28
PDZRN3-202ENST00000308537 CATIPQ7Z7H3 387 aa23.03■■□□□ 1.28
PDZRN3-202ENST00000308537 HOMER1Q86YM7 354 aa23.03■■□□□ 1.28
PDZRN3-202ENST00000308537 NSUN6Q8TEA1 469 aaKnown RBP23.03■■□□□ 1.28
PDZRN3-202ENST00000308537 SCFD2Q8WU76 684 aa23.03■■□□□ 1.28
PDZRN3-202ENST00000308537 CCDC136Q96JN2 1154 aa23.03■■□□□ 1.28
PDZRN3-202ENST00000308537 TMEM87BQ96K49 555 aa23.03■■□□□ 1.28
PDZRN3-202ENST00000308537 RMDN3Q96TC7 470 aa23.03■■□□□ 1.28
PDZRN3-202ENST00000308537 PCDHA1Q9Y5I3 950 aa23.03■■□□□ 1.28
PDZRN3-202ENST00000308537 CDH23Q9H251 3354 aa23.03■■□□□ 1.28
PDZRN3-202ENST00000308537 CABYRO75952 493 aa23.02■■□□□ 1.28
PDZRN3-202ENST00000308537 CFBP00751 764 aa23.02■■□□□ 1.28
PDZRN3-202ENST00000308537 SHHQ15465 462 aa23.02■■□□□ 1.28
PDZRN3-202ENST00000308537 TSGA10IPQ3SY00 556 aa23.02■■□□□ 1.28
PDZRN3-202ENST00000308537 IWS1Q96ST2 819 aa23.02■■□□□ 1.28
PDZRN3-202ENST00000308537 SPZ1Q9BXG8 430 aa23.02■■□□□ 1.28
PDZRN3-202ENST00000308537 PXMP2Q9NR77 195 aa23.02■■□□□ 1.28
PDZRN3-202ENST00000308537 TMEM39AQ9NV64 488 aa23.02■■□□□ 1.28
PDZRN3-202ENST00000308537 COL6A3P12111 3177 aa23.01■■□□□ 1.27
PDZRN3-202ENST00000308537 PNMA6FA0A0J9YX94 578 aa23.01■■□□□ 1.27
PDZRN3-202ENST00000308537 DCDC2CA8MYV0 355 aa23.01■■□□□ 1.27
PDZRN3-202ENST00000308537 RGS20O76081 388 aa23.01■■□□□ 1.27
PDZRN3-202ENST00000308537 PSMC6P62333 389 aa23.01■■□□□ 1.27
PDZRN3-202ENST00000308537 PURAQ00577 322 aaKnown RBP23.01■■□□□ 1.27
PDZRN3-202ENST00000308537 PPP2R5BQ15173 497 aa23.01■■□□□ 1.27
PDZRN3-202ENST00000308537 ADCK5Q3MIX3 580 aa23.01■■□□□ 1.27
PDZRN3-202ENST00000308537 GPR153Q6NV75 609 aa23.01■■□□□ 1.27
PDZRN3-202ENST00000308537 LRRC2Q9BYS8 371 aa23.01■■□□□ 1.27
PDZRN3-202ENST00000308537 MROH7Q68CQ1 1323 aa23.01■■□□□ 1.27
PDZRN3-202ENST00000308537 A6NJR5 290 aa23■■□□□ 1.27
PDZRN3-202ENST00000308537 NKRFO15226 690 aaKnown RBP eCLIP23■■□□□ 1.27
PDZRN3-202ENST00000308537 PLEKHA8P1O95397 391 aa23■■□□□ 1.27
PDZRN3-202ENST00000308537 EIF2AK2P19525 551 aaKnown RBP23■■□□□ 1.27
PDZRN3-202ENST00000308537 SMARCA1P28370 1054 aa23■■□□□ 1.27
PDZRN3-202ENST00000308537 EXOSC10Q01780 885 aaKnown RBP23■■□□□ 1.27
PDZRN3-202ENST00000308537 ITGA7Q13683 1181 aa23■■□□□ 1.27
PDZRN3-202ENST00000308537 CASC1Q6TDU7 716 aa23■■□□□ 1.27
PDZRN3-202ENST00000308537 SGMS1Q86VZ5 419 aa23■■□□□ 1.27
PDZRN3-202ENST00000308537 SRBD1Q8N5C6 995 aaKnown RBP23■■□□□ 1.27
PDZRN3-202ENST00000308537 IL31RAQ8NI17 732 aa23■■□□□ 1.27
PDZRN3-202ENST00000308537 KCNB2Q92953 911 aa23■■□□□ 1.27
PDZRN3-202ENST00000308537 PDCD2LQ9BRP1 358 aa23■■□□□ 1.27
PDZRN3-202ENST00000308537 MAP3K20Q9NYL2 800 aaKnown RBP23■■□□□ 1.27
PDZRN3-202ENST00000308537 TIMP1P01033 207 aa22.99■■□□□ 1.27
PDZRN3-202ENST00000308537 NR3C2P08235 984 aa22.99■■□□□ 1.27
PDZRN3-202ENST00000308537 TXNP10599 105 aaKnown RBP22.99■■□□□ 1.27
PDZRN3-202ENST00000308537 RXRAP19793 462 aa22.99■■□□□ 1.27
PDZRN3-202ENST00000308537 HOXA13P31271 388 aaPredicted RBP22.99■■□□□ 1.27
PDZRN3-202ENST00000308537 SAMD3Q8N6K7 520 aa22.99■■□□□ 1.27
PDZRN3-202ENST00000308537 OR6J1Q8NGC5 347 aa22.99■■□□□ 1.27
PDZRN3-202ENST00000308537 MPHOSPH6Q99547 160 aaKnown RBP22.99■■□□□ 1.27
PDZRN3-202ENST00000308537 MYH7BA7E2Y1 1941 aa22.99■■□□□ 1.27
PDZRN3-202ENST00000308537 RAG1P15918 1043 aa22.98■■□□□ 1.27
PDZRN3-202ENST00000308537 ARHGAP1Q07960 439 aa22.98■■□□□ 1.27
PDZRN3-202ENST00000308537 TTLL4Q14679 1199 aa22.98■■□□□ 1.27
PDZRN3-202ENST00000308537 STXBP2Q15833 593 aa22.98■■□□□ 1.27
PDZRN3-202ENST00000308537 TMTC2Q8N394 836 aa22.98■■□□□ 1.27
PDZRN3-202ENST00000308537 VTI1AQ96AJ9 217 aa22.98■■□□□ 1.27
PDZRN3-202ENST00000308537 FRMPD4Q14CM0 1322 aa22.98■■□□□ 1.27
PDZRN3-202ENST00000308537 B4DLN1 442 aa22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 ZEB2O60315 1214 aa22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 MRPL12P52815 198 aaKnown RBP22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 LY6KQ17RY6 165 aa22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 ARHGEF16Q5VV41 709 aa22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 SEPT14Q6ZU15 432 aa22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 C16orf59Q7L2K0 433 aa22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 VSIG10LQ86VR7 867 aa22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 RAB11FIP4Q86YS3 637 aa22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 CMTR1Q8N1G2 835 aaKnown RBP22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 CTCFLQ8NI51 663 aaPredicted RBP22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 DDX41Q9UJV9 622 aaKnown RBP22.97■■□□□ 1.27
PDZRN3-202ENST00000308537 B4GALT4O60513 344 aa22.96■■□□□ 1.27
PDZRN3-202ENST00000308537 EIF3JO75822 258 aaKnown RBP22.96■■□□□ 1.27
PDZRN3-202ENST00000308537 CPT1AP50416 773 aa22.96■■□□□ 1.27
PDZRN3-202ENST00000308537 PGM5Q15124 567 aa22.96■■□□□ 1.27
PDZRN3-202ENST00000308537 MFSD5Q6N075 450 aa22.96■■□□□ 1.27
PDZRN3-202ENST00000308537 VWCEQ96DN2 955 aa22.96■■□□□ 1.27
PDZRN3-202ENST00000308537 TCEANC2Q96MN5 208 aa22.96■■□□□ 1.27
PDZRN3-202ENST00000308537 NEK1Q96PY6 1258 aa22.96■■□□□ 1.27
PDZRN3-202ENST00000308537 POLR3EQ9NVU0 708 aa22.96■■□□□ 1.27
PDZRN3-202ENST00000308537 UMODL1Q5DID0 1318 aa22.96■■□□□ 1.27
PDZRN3-202ENST00000308537 KIF5BP33176 963 aa22.95■■□□□ 1.26
PDZRN3-202ENST00000308537 RNF20Q5VTR2 975 aa22.95■■□□□ 1.26
PDZRN3-202ENST00000308537 PIBF1Q8WXW3 757 aa22.95■■□□□ 1.26
PDZRN3-202ENST00000308537 SEZ6LQ9BYH1 1024 aa22.95■■□□□ 1.26
PDZRN3-202ENST00000308537 TRPV6Q9H1D0 765 aa22.95■■□□□ 1.26
PDZRN3-202ENST00000308537 ALDH8A1Q9H2A2 487 aaPredicted RBP22.95■■□□□ 1.26
PDZRN3-202ENST00000308537 BRPF3Q9ULD4 1205 aa22.95■■□□□ 1.26
PDZRN3-202ENST00000308537 CCDC69A6NI79 296 aa22.94■■□□□ 1.26
PDZRN3-202ENST00000308537 GCOM1H8Y6P7 765 aaPredicted RBP22.94■■□□□ 1.26
PDZRN3-202ENST00000308537 POLR2MP0CAP2 368 aa22.94■■□□□ 1.26
PDZRN3-202ENST00000308537 FPGSQ05932 587 aa22.94■■□□□ 1.26
PDZRN3-202ENST00000308537 FUT2Q10981 343 aa22.94■■□□□ 1.26
PDZRN3-202ENST00000308537 APOA5Q6Q788 366 aa22.94■■□□□ 1.26
PDZRN3-202ENST00000308537 TMTC3Q6ZXV5 915 aa22.94■■□□□ 1.26
PDZRN3-202ENST00000308537 Q7L0L9 218 aa22.94■■□□□ 1.26
PDZRN3-202ENST00000308537 AFG1LQ8WV93 481 aa22.94■■□□□ 1.26
PDZRN3-202ENST00000308537 EMID1Q96A84 441 aaPredicted RBP22.94■■□□□ 1.26
PDZRN3-202ENST00000308537 LZTS2Q9BRK4 669 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 221.3 ms