RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 USP17L20D6RJB6 530 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 PIK3CDO00329 1044 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 GTPBP6O43824 516 aaPredicted RBP13.42□□□□□ -0.26
TRIM40-205ENST00000307859 CDC25BP30305 580 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 UBA7P41226 1012 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 STAT6P42226 847 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 AFMP43652 599 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 USP11P51784 963 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 USP17L24Q0WX57 530 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 KARSQ15046 597 aaKnown RBP13.42□□□□□ -0.26
TRIM40-205ENST00000307859 NAALADL2Q58DX5 795 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 HABP4Q5JVS0 413 aaKnown RBP13.42□□□□□ -0.26
TRIM40-205ENST00000307859 NBPF12Q5TAG4 269 aaPredicted RBP13.42□□□□□ -0.26
TRIM40-205ENST00000307859 ANGEL2Q5VTE6 544 aaKnown RBP13.42□□□□□ -0.26
TRIM40-205ENST00000307859 USP17L6PQ6QN14 398 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 CCDC84Q86UT8 332 aaPredicted RBP13.42□□□□□ -0.26
TRIM40-205ENST00000307859 LPAR1Q92633 364 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 MBOAT7Q96N66 472 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 GSDMAQ96QA5 445 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 MTRQ99707 1265 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 ZNF341Q9BYN7 854 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 PPP2R3BQ9Y5P8 575 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 SSC5DA1L4H1 1573 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 WDR46O15213 610 aaKnown RBP13.41□□□□□ -0.26
TRIM40-205ENST00000307859 CELF2O95319 508 aaKnown RBP13.41□□□□□ -0.26
TRIM40-205ENST00000307859 FOSP01100 380 aaPredicted RBP13.41□□□□□ -0.26
TRIM40-205ENST00000307859 CYP3A7P24462 503 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 CDC25AP30304 524 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 EPS15P42566 896 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 ZYXQ15942 572 aaKnown RBP13.41□□□□□ -0.26
TRIM40-205ENST00000307859 USH1GQ495M9 461 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 CABP7Q86V35 215 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 ZSCAN30Q86W11 494 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 P2RX7Q99572 595 aaKnown RBP13.41□□□□□ -0.26
TRIM40-205ENST00000307859 FEZ1Q99689 392 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 TRIM5Q9C035 493 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 CUEDC2Q9H467 287 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 MAGEF1Q9HAY2 307 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 DDX25Q9UHL0 483 aaKnown RBP13.41□□□□□ -0.26
TRIM40-205ENST00000307859 DACH1Q9UI36 760 aa13.41□□□□□ -0.26
TRIM40-205ENST00000307859 PITPNM2Q9BZ72 1349 aa13.4□□□□□ -0.26
TRIM40-205ENST00000307859 PTMAP06454 111 aaKnown RBP13.4□□□□□ -0.26
TRIM40-205ENST00000307859 TECP42680 631 aa13.4□□□□□ -0.26
TRIM40-205ENST00000307859 MYL5Q02045 173 aa13.4□□□□□ -0.26
TRIM40-205ENST00000307859 CT47A1Q5JQC4 288 aaPredicted RBP13.4□□□□□ -0.26
TRIM40-205ENST00000307859 RRAGBQ5VZM2 374 aa13.4□□□□□ -0.26
TRIM40-205ENST00000307859 MRFAP1L1Q96HT8 127 aa13.4□□□□□ -0.26
TRIM40-205ENST00000307859 MMTAG2Q9BU76 263 aaKnown RBP13.4□□□□□ -0.26
TRIM40-205ENST00000307859 GGA3Q9NZ52 723 aa13.4□□□□□ -0.26
TRIM40-205ENST00000307859 MYL1P05976 194 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 INPP5BP32019 993 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 SREBF1P36956 1147 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 TXKP42681 527 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 HIRAP54198 1017 aaPredicted RBP13.39□□□□□ -0.27
TRIM40-205ENST00000307859 TPM4P67936 248 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 PDIA5Q14554 519 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 TMEM266Q2M3C6 531 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 CTU1Q7Z7A3 348 aaKnown RBP13.39□□□□□ -0.27
TRIM40-205ENST00000307859 SCYL3Q8IZE3 742 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 KIFC2Q96AC6 838 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 WDR18Q9BV38 432 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 RAB34Q9BZG1 259 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 HSD3B7Q9H2F3 369 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 RRAGDQ9NQL2 400 aaPredicted RBP13.39□□□□□ -0.27
TRIM40-205ENST00000307859 KBTBD4Q9NVX7 518 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 ZKSCAN5Q9Y2L8 839 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 ABCB11O95342 1321 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 TAL1P17542 331 aaPredicted RBP13.39□□□□□ -0.27
TRIM40-205ENST00000307859 CASP1P29466 404 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 ARHGAP4P98171 946 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 LRRC15Q8TF66 581 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 HAS1Q92839 578 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 FBXO28Q9NVF7 368 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
TRIM40-205ENST00000307859 LOC285556D6RIA3 1793 aa13.39□□□□□ -0.27
TRIM40-205ENST00000307859 LOXHD1Q8IVV2 1947 aa13.38□□□□□ -0.27
TRIM40-205ENST00000307859 SPDYE3A6NKU9 549 aa13.38□□□□□ -0.27
TRIM40-205ENST00000307859 GOLGA6L6A8MZA4 724 aa13.38□□□□□ -0.27
TRIM40-205ENST00000307859 PLCG1P19174 1290 aa13.38□□□□□ -0.27
TRIM40-205ENST00000307859 ERCC5P28715 1186 aaPredicted RBP13.38□□□□□ -0.27
TRIM40-205ENST00000307859 CIITAP33076 1130 aa13.38□□□□□ -0.27
TRIM40-205ENST00000307859 SEMA3FQ13275 785 aa13.38□□□□□ -0.27
TRIM40-205ENST00000307859 CUL4BQ13620 913 aa13.38□□□□□ -0.27
TRIM40-205ENST00000307859 CCDC174Q6PII3 467 aa13.38□□□□□ -0.27
TRIM40-205ENST00000307859 RASSF8Q8NHQ8 419 aa13.38□□□□□ -0.27
TRIM40-205ENST00000307859 ENOX1Q8TC92 643 aaKnown RBP13.38□□□□□ -0.27
TRIM40-205ENST00000307859 STAMQ92783 540 aa13.38□□□□□ -0.27
TRIM40-205ENST00000307859 KCNMB3Q9NPA1 279 aa13.38□□□□□ -0.27
TRIM40-205ENST00000307859 ADARB2Q9NS39 739 aaKnown RBP13.38□□□□□ -0.27
TRIM40-205ENST00000307859 TPM3P06753 285 aa13.37□□□□□ -0.27
TRIM40-205ENST00000307859 CYP3A4P08684 503 aa13.37□□□□□ -0.27
TRIM40-205ENST00000307859 USP14P54578 494 aa13.37□□□□□ -0.27
TRIM40-205ENST00000307859 PKN2Q16513 984 aaKnown RBP13.37□□□□□ -0.27
TRIM40-205ENST00000307859 Q4G0T1 1027 aa13.37□□□□□ -0.27
TRIM40-205ENST00000307859 PRPF38AQ8NAV1 312 aaKnown RBP13.37□□□□□ -0.27
TRIM40-205ENST00000307859 CALML4Q96GE6 196 aa13.37□□□□□ -0.27
TRIM40-205ENST00000307859 SLF1Q9BQI6 1058 aa13.37□□□□□ -0.27
TRIM40-205ENST00000307859 BLZF1Q9H2G9 400 aa13.37□□□□□ -0.27
TRIM40-205ENST00000307859 TTC12Q9H892 705 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms