RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 MTMR8Q96EF0 704 aa20.87■□□□□ 0.93
CHRNB1-201ENST00000306071 TSKSQ9UJT2 592 aa20.87■□□□□ 0.93
CHRNB1-201ENST00000306071 BICDL2A1A5D9 508 aa20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 PPP1R12AO14974 1030 aaPredicted RBP20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 TRAPPC10P48553 1259 aa20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 MAGEC3Q8TD91 643 aa20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 SLC24A3Q9HC58 644 aa20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 BCCIPQ9P287 314 aaKnown RBP eCLIP20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 RNF14Q9UBS8 474 aa20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 PDE8BO95263 885 aa20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 GNAT2P19087 354 aa20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 HNRNPH3P31942 346 aaKnown RBP20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 GBP2P32456 591 aaPredicted RBP20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 RNASE9P60153 205 aaKnown RBP20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 HLTFQ14527 1009 aaKnown RBP eCLIP20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 QPCTQ16769 361 aa20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 IFIT1BQ5T764 474 aaKnown RBP20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 FMNL3Q8IVF7 1028 aa20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 MIGA1Q8NAN2 632 aa20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 SEC16BQ96JE7 1060 aa20.86■□□□□ 0.93
CHRNB1-201ENST00000306071 PP2D1A8MPX8 630 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 RPSAP08865 295 aaKnown RBP20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 SCTRP47872 440 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 NAA25Q14CX7 972 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 NAALADL2Q58DX5 795 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 RRAGAQ7L523 313 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 CACNA2D3Q8IZS8 1091 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 ENAHQ8N8S7 591 aaPredicted RBP20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 TRIM6Q9C030 488 aaPredicted RBP20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 MMRN2Q9H8L6 949 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 BACH1O14867 736 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 TRAPPC3O43617 180 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 LCA5LO95447 670 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 ERCC3P19447 782 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 CCNE1P24864 410 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 TMOD1P28289 359 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 GFPT1Q06210 699 aaPredicted RBP20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 ARL6IP4Q66PJ3 421 aaKnown RBP20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 C3orf20Q8ND61 904 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 ATP6V0A4Q9HBG4 840 aa20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 RBM28Q9NW13 759 aaKnown RBP20.85■□□□□ 0.93
CHRNB1-201ENST00000306071 EPHB6O15197 1021 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 IFFO1Q0D2I5 559 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 KIRREL3Q8IZU9 778 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 VGLL2Q8N8G2 317 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 HELBQ8NG08 1087 aaPredicted RBP20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 OR2W6PQ8NHA6 318 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 IQCDQ96DY2 449 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 LEMD3Q9Y2U8 911 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 OPLAHO14841 1288 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 NKRFO15226 690 aaKnown RBP eCLIP20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 HSPA9P38646 679 aaKnown RBP20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 UBA7P41226 1012 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 CDC37Q16543 378 aaPredicted RBP20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 ZSCAN29Q8IWY8 852 aaPredicted RBP20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 ZBTB38Q8NAP3 1195 aaPredicted RBP20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 TBC1D22AQ8WUA7 517 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 ZSCAN10Q96SZ4 725 aaPredicted RBP20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 PLA2G12BQ9BX93 195 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 GLI3P10071 1580 aa20.84■□□□□ 0.93
CHRNB1-201ENST00000306071 BAZ2BQ9UIF8 2168 aaKnown RBP20.83■□□□□ 0.93
CHRNB1-201ENST00000306071 LRRC53A6NM62 1247 aa20.83■□□□□ 0.93
CHRNB1-201ENST00000306071 PPP1R12BO60237 982 aaPredicted RBP20.83■□□□□ 0.93
CHRNB1-201ENST00000306071 CCDC178Q5BJE1 867 aa20.83■□□□□ 0.93
CHRNB1-201ENST00000306071 PLCB1Q9NQ66 1216 aa20.83■□□□□ 0.93
CHRNB1-201ENST00000306071 PJA2O43164 708 aa20.83■□□□□ 0.92
CHRNB1-201ENST00000306071 SLC1A4P43007 532 aa20.83■□□□□ 0.92
CHRNB1-201ENST00000306071 PDE4DQ08499 809 aa20.83■□□□□ 0.92
CHRNB1-201ENST00000306071 KLHL7Q8IXQ5 586 aa20.83■□□□□ 0.92
CHRNB1-201ENST00000306071 LPIN2Q92539 896 aa20.83■□□□□ 0.92
CHRNB1-201ENST00000306071 FTCDO95954 541 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 HSD17B3P37058 310 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 LRIG3Q6UXM1 1119 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 DTHD1Q6ZMT9 781 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 TMC4Q7Z404 712 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 RNF10Q8N5U6 811 aaKnown RBP20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 CCDC47Q96A33 483 aaKnown RBP20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 SLC12A6Q9UHW9 1150 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 ADAMTS3O15072 1205 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 RAD51CO43502 376 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 MYL1P05976 194 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 CTNNA1P35221 906 aaKnown RBP20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 RASGRF1Q13972 1273 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 MSL1Q68DK7 614 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 TBC1D31Q96DN5 1066 aa20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 TAF1DQ9H5J8 278 aaPredicted RBP20.82■□□□□ 0.92
CHRNB1-201ENST00000306071 PALMO75781 387 aa20.81■□□□□ 0.92
CHRNB1-201ENST00000306071 XRCC4Q13426 336 aa20.81■□□□□ 0.92
CHRNB1-201ENST00000306071 GKAP1Q5VSY0 366 aaPredicted RBP20.81■□□□□ 0.92
CHRNB1-201ENST00000306071 TMTC3Q6ZXV5 915 aa20.81■□□□□ 0.92
CHRNB1-201ENST00000306071 CPLX4Q7Z7G2 160 aa20.81■□□□□ 0.92
CHRNB1-201ENST00000306071 HVCN1Q96D96 273 aa20.81■□□□□ 0.92
CHRNB1-201ENST00000306071 TNNC1P63316 161 aa20.81■□□□□ 0.92
CHRNB1-201ENST00000306071 TDRD12Q587J7 1177 aaKnown RBP20.81■□□□□ 0.92
CHRNB1-201ENST00000306071 TLDC1Q6P9B6 456 aa20.81■□□□□ 0.92
CHRNB1-201ENST00000306071 C4orf32Q8N8J7 132 aa20.81■□□□□ 0.92
CHRNB1-201ENST00000306071 KBTBD4Q9NVX7 518 aa20.81■□□□□ 0.92
CHRNB1-201ENST00000306071 SMIM22K7EJ46 135 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 STK4Q13043 487 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 VWA3BQ502W6 1294 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms