RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ANKRD20A12PQ8NF67 263 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 CHURC1Q8WUH1 139 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 CDK5RAP3Q96JB5 506 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 ADD3Q9UEY8 706 aaKnown RBP21.8■■□□□ 1.08
HOXC4-201ENST00000303406 USP17L15C9J2P7 530 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 USP17L13C9JLJ4 530 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 USP17L11C9JVI0 530 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 USP17L18D6R9N7 530 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 USP17L22D6RA61 530 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 USP17L17D6RBQ6 530 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 USP17L19D6RCP7 530 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 USP17L20D6RJB6 530 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 NFKBIEO00221 500 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 PSMA7O14818 248 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 CCP110O43303 1012 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 SREBF1P36956 1147 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 PBX1P40424 430 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 USP17L24Q0WX57 530 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 TNFAIP1Q13829 316 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 Q4G0T1 1027 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 USP17L6PQ6QN14 398 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 FCHSD1Q86WN1 690 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 CCAR2Q8N163 923 aaKnown RBP21.8■■□□□ 1.08
HOXC4-201ENST00000303406 TMEM39BQ9GZU3 492 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 BLOC1S4Q9NUP1 217 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 GDAQ9Y2T3 454 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 STK24Q9Y6E0 443 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 ITIH6Q6UXX5 1313 aa21.79■■□□□ 1.08
HOXC4-201ENST00000303406 ASNSP08243 561 aa21.79■■□□□ 1.08
HOXC4-201ENST00000303406 CIITAP33076 1130 aa21.79■■□□□ 1.08
HOXC4-201ENST00000303406 ACER1Q8TDN7 264 aa21.79■■□□□ 1.08
HOXC4-201ENST00000303406 SNX29Q8TEQ0 813 aa21.79■■□□□ 1.08
HOXC4-201ENST00000303406 LARP4BQ92615 738 aaKnown RBP21.79■■□□□ 1.08
HOXC4-201ENST00000303406 RAD54LQ92698 747 aa21.79■■□□□ 1.08
HOXC4-201ENST00000303406 PLIN2Q99541 437 aa21.79■■□□□ 1.08
HOXC4-201ENST00000303406 NT5C3AQ9H0P0 336 aa21.79■■□□□ 1.08
HOXC4-201ENST00000303406 RANBP17Q9H2T7 1088 aaKnown RBP21.79■■□□□ 1.08
HOXC4-201ENST00000303406 EXOC1Q9NV70 894 aa21.79■■□□□ 1.08
HOXC4-201ENST00000303406 KIF2AO00139 706 aaPredicted RBP21.78■■□□□ 1.08
HOXC4-201ENST00000303406 TUBB4AP04350 444 aa21.78■■□□□ 1.08
HOXC4-201ENST00000303406 CYP3A4P08684 503 aa21.78■■□□□ 1.08
HOXC4-201ENST00000303406 ECE1P42892 770 aa21.78■■□□□ 1.08
HOXC4-201ENST00000303406 ARHGAP4P98171 946 aa21.78■■□□□ 1.08
HOXC4-201ENST00000303406 UNC13DQ70J99 1090 aa21.78■■□□□ 1.08
HOXC4-201ENST00000303406 PCDHA12Q9UN75 941 aa21.78■■□□□ 1.08
HOXC4-201ENST00000303406 SPDYE3A6NKU9 549 aa21.77■■□□□ 1.08
HOXC4-201ENST00000303406 MARCH6O60337 910 aa21.77■■□□□ 1.08
HOXC4-201ENST00000303406 ASIC1P78348 528 aa21.77■■□□□ 1.08
HOXC4-201ENST00000303406 THAP9Q9H5L6 903 aa21.77■■□□□ 1.08
HOXC4-201ENST00000303406 FEM1BQ9UK73 627 aa21.77■■□□□ 1.08
HOXC4-201ENST00000303406 BICDL2A1A5D9 508 aa21.76■■□□□ 1.07
HOXC4-201ENST00000303406 POTEMA6NI47 508 aa21.76■■□□□ 1.07
HOXC4-201ENST00000303406 EEF1GP26641 437 aaKnown RBP21.76■■□□□ 1.07
HOXC4-201ENST00000303406 PDE4DQ08499 809 aa21.76■■□□□ 1.07
HOXC4-201ENST00000303406 NBPF9Q3BBW0 867 aa21.76■■□□□ 1.07
HOXC4-201ENST00000303406 HSP90AA4PQ58FG1 418 aa21.76■■□□□ 1.07
HOXC4-201ENST00000303406 NYAP1Q6ZVC0 841 aa21.76■■□□□ 1.07
HOXC4-201ENST00000303406 MYRIPQ8NFW9 859 aa21.76■■□□□ 1.07
HOXC4-201ENST00000303406 SGIP1Q9BQI5 828 aa21.76■■□□□ 1.07
HOXC4-201ENST00000303406 ATAD5Q96QE3 1844 aa21.76■■□□□ 1.07
HOXC4-201ENST00000303406 CCNE1P24864 410 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 KRT31Q15323 416 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 TCP11X2Q5H9J9 407 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 KIAA1755Q5JYT7 1200 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 FAM83BQ5T0W9 1011 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 FOXR2Q6PJQ5 311 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 OPLAHO14841 1288 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 ARHGAP6O43182 974 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 TNNT1P13805 278 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 COPB1P53618 953 aaKnown RBP21.75■■□□□ 1.07
HOXC4-201ENST00000303406 PSMD2Q13200 908 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 E4F1Q66K89 784 aaPredicted RBP21.75■■□□□ 1.07
HOXC4-201ENST00000303406 KCTD17Q8N5Z5 321 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 ETNPPLQ8TBG4 499 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 FAM20AQ96MK3 541 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 DEFB129Q9H1M3 183 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 PAXBP1Q9Y5B6 917 aa21.75■■□□□ 1.07
HOXC4-201ENST00000303406 MYMKA6NI61 221 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 KCNJ18B7U540 433 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 STX10O60499 249 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 GTF2F1P35269 517 aaKnown RBP eCLIP21.74■■□□□ 1.07
HOXC4-201ENST00000303406 KCNJ12Q14500 433 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 MCM6Q14566 821 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 RASA3Q14644 834 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 USH1GQ495M9 461 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 TTI2Q6NXR4 508 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 TMEM139Q8IV31 216 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 SPICE1Q8N0Z3 855 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 TC2NQ8N9U0 490 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 P2RX5Q93086 422 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 TEPSINQ96N21 525 aa21.74■■□□□ 1.07
HOXC4-201ENST00000303406 P2RX7Q99572 595 aaKnown RBP21.74■■□□□ 1.07
HOXC4-201ENST00000303406 MRPL11Q9Y3B7 192 aaKnown RBP21.74■■□□□ 1.07
HOXC4-201ENST00000303406 ABCB11O95342 1321 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 UQCRHLA0A096LP55 91 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 PHF20L1A8MW92 1017 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 FZD9O00144 591 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 UQCRHP07919 91 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 SNAP25P60880 206 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 TRIM14Q14142 442 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms