RNA–Protein interactions for RNA: ENST00000301453.7

OTUB1-201, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,493 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-201ENST00000301453 NEDD1Q8NHV4 660 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 CEP95Q96GE4 821 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 CCDC42Q96M95 316 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 NUDT12Q9BQG2 462 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 FAM204AQ9H8W3 233 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 MLXIPQ9HAP2 919 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 MED4Q9NPJ6 270 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 JADE2Q9NQC1 790 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 USP17L5A8MUK1 530 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 GNA11P29992 359 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 BTDP43251 543 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 TNNT3P45378 269 aaPredicted RBP18.15■□□□□ 0.5
OTUB1-201ENST00000301453 GSTO1P78417 241 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 KIF5AQ12840 1032 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 VWA3BQ502W6 1294 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 CNNM4Q6P4Q7 775 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 DYMQ7RTS9 669 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 GLIS3Q8NEA6 775 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 SECISBP2LQ93073 1101 aaKnown RBP18.15■□□□□ 0.5
OTUB1-201ENST00000301453 RRP36Q96EU6 259 aaKnown RBP18.15■□□□□ 0.5
OTUB1-201ENST00000301453 FAM207AQ9NSI2 230 aaPredicted RBP18.15■□□□□ 0.5
OTUB1-201ENST00000301453 SLC37A4O43826 429 aa18.14■□□□□ 0.5
OTUB1-201ENST00000301453 RNF40O75150 1001 aa18.14■□□□□ 0.5
OTUB1-201ENST00000301453 IPO7O95373 1038 aaKnown RBP18.14■□□□□ 0.5
OTUB1-201ENST00000301453 ERCC3P19447 782 aa18.14■□□□□ 0.5
OTUB1-201ENST00000301453 AMPD3Q01432 767 aa18.14■□□□□ 0.5
OTUB1-201ENST00000301453 CKAP4Q07065 602 aaKnown RBP18.14■□□□□ 0.5
OTUB1-201ENST00000301453 EZH2Q15910 746 aaKnown RBP18.14■□□□□ 0.5
OTUB1-201ENST00000301453 FAM98CQ17RN3 349 aaKnown RBP18.14■□□□□ 0.5
OTUB1-201ENST00000301453 CCNI2Q6ZMN8 369 aaPredicted RBP18.14■□□□□ 0.5
OTUB1-201ENST00000301453 C2CD5Q86YS7 1000 aa18.14■□□□□ 0.5
OTUB1-201ENST00000301453 COG1Q8WTW3 980 aa18.14■□□□□ 0.5
OTUB1-201ENST00000301453 RPGRIP1Q96KN7 1286 aa18.14■□□□□ 0.5
OTUB1-201ENST00000301453 NDST4Q9H3R1 872 aa18.14■□□□□ 0.5
OTUB1-201ENST00000301453 CDK5RAP2Q96SN8 1893 aa18.14■□□□□ 0.49
OTUB1-201ENST00000301453 FKBP15Q5T1M5 1219 aa18.14■□□□□ 0.49
OTUB1-201ENST00000301453 SV2BQ7L1I2 683 aa18.14■□□□□ 0.49
OTUB1-201ENST00000301453 CAGE1Q8TC20 777 aa18.14■□□□□ 0.49
OTUB1-201ENST00000301453 ARHGEF1Q92888 912 aaKnown RBP18.14■□□□□ 0.49
OTUB1-201ENST00000301453 LEMD3Q9Y2U8 911 aa18.14■□□□□ 0.49
OTUB1-201ENST00000301453 PCDHA13Q9Y5I0 950 aa18.14■□□□□ 0.49
OTUB1-201ENST00000301453 EIF4A3P38919 411 aaKnown RBP18.13■□□□□ 0.49
OTUB1-201ENST00000301453 ATP2B2Q01814 1243 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 CCDC96Q2M329 555 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 RC3H1Q5TC82 1133 aaKnown RBP18.13■□□□□ 0.49
OTUB1-201ENST00000301453 KCNK18Q7Z418 384 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 REXO1Q8N1G1 1221 aaKnown RBP18.13■□□□□ 0.49
OTUB1-201ENST00000301453 HDAC7Q8WUI4 952 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 CALML4Q96GE6 196 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 SH2D4AQ9H788 454 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 SNX12Q9UMY4 172 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 VGLL3A8MV65 326 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 AGPSO00116 658 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 MOCS3O95396 460 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 TDP2O95551 362 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 COA7Q96BR5 231 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 IFIH1Q9BYX4 1025 aaKnown RBP18.13■□□□□ 0.49
OTUB1-201ENST00000301453 SALL4Q9UJQ4 1053 aa18.13■□□□□ 0.49
OTUB1-201ENST00000301453 POTEMA6NI47 508 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 RPS6KA5O75582 802 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 PPP1R2P41236 205 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 KIF11P52732 1056 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 GRAPQ13588 217 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 SPA17Q15506 151 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 UNC13DQ70J99 1090 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 CCDC155Q8N6L0 562 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 GRAPLQ8TC17 118 aaPredicted RBP18.12■□□□□ 0.49
OTUB1-201ENST00000301453 ZFP91Q96JP5 570 aaPredicted RBP18.12■□□□□ 0.49
OTUB1-201ENST00000301453 DRC1Q96MC2 740 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 SELENOOQ9BVL4 669 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 SEC63Q9UGP8 760 aaKnown RBP18.12■□□□□ 0.49
OTUB1-201ENST00000301453 FRMPD2Q68DX3 1309 aaPredicted RBP18.12■□□□□ 0.49
OTUB1-201ENST00000301453 GPR75-ASB3A0A0A6YYF3 556 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 LDHCP07864 332 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 MRPS25P82663 173 aaKnown RBP18.12■□□□□ 0.49
OTUB1-201ENST00000301453 LRRC31Q6UY01 552 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 LRRC55Q6ZSA7 311 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 TEX11Q8IYF3 940 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 BAP1Q92560 729 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 LARP4BQ92615 738 aaKnown RBP18.12■□□□□ 0.49
OTUB1-201ENST00000301453 ACBD3Q9H3P7 528 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 RIOX1Q9H6W3 641 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 MMRN2Q9H8L6 949 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 SMARCAL1Q9NZC9 954 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 JRKLQ9Y4A0 524 aa18.12■□□□□ 0.49
OTUB1-201ENST00000301453 LRRC53A6NM62 1247 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 TRIM66O15016 1216 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 LCA5LO95447 670 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 MCM3P25205 808 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 GGCXP38435 758 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 NOVP48745 357 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 RHBDL3P58872 404 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 LRRC41Q15345 812 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 CALCRLQ16602 461 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 MAP9Q49MG5 647 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 LEKR1Q6ZMV7 388 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 DMGDHQ9UI17 866 aaKnown RBP18.11■□□□□ 0.49
OTUB1-201ENST00000301453 MYH10P35580 1976 aa18.11■□□□□ 0.49
OTUB1-201ENST00000301453 PVALEFA0A1B0GWK0 134 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms