RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SRRTQ9BXP5 876 aaKnown RBP24.55■■□□□ 1.52
TPM4-201ENST00000300933 KANSL2Q9H9L4 492 aa24.55■■□□□ 1.52
TPM4-201ENST00000300933 GRB10Q13322 594 aa24.55■■□□□ 1.52
TPM4-201ENST00000300933 TRIM65Q6PJ69 517 aa24.55■■□□□ 1.52
TPM4-201ENST00000300933 KCNK18Q7Z418 384 aa24.55■■□□□ 1.52
TPM4-201ENST00000300933 PPFIBP1Q86W92 1011 aa24.55■■□□□ 1.52
TPM4-201ENST00000300933 PPP2R2CQ9Y2T4 447 aa24.55■■□□□ 1.52
TPM4-201ENST00000300933 AKR1B15C9JRZ8 316 aaPredicted RBP24.54■■□□□ 1.52
TPM4-201ENST00000300933 NKRFO15226 690 aaKnown RBP eCLIP24.54■■□□□ 1.523e-8■■■□□ 18
TPM4-201ENST00000300933 MARCH6O60337 910 aa24.54■■□□□ 1.52
TPM4-201ENST00000300933 CDC37Q16543 378 aaPredicted RBP24.54■■□□□ 1.52
TPM4-201ENST00000300933 FILIP1LQ4L180 1135 aa24.54■■□□□ 1.52
TPM4-201ENST00000300933 AK8Q96MA6 479 aa24.54■■□□□ 1.52
TPM4-201ENST00000300933 SLC39A2Q9NP94 309 aa24.54■■□□□ 1.52
TPM4-201ENST00000300933 ERCC3P19447 782 aa24.54■■□□□ 1.52
TPM4-201ENST00000300933 COPB1P53618 953 aaKnown RBP24.54■■□□□ 1.52
TPM4-201ENST00000300933 RAD51AP2Q09MP3 1159 aa24.54■■□□□ 1.52
TPM4-201ENST00000300933 ECM1Q16610 540 aa24.54■■□□□ 1.52
TPM4-201ENST00000300933 ZBTB9Q96C00 473 aa24.54■■□□□ 1.52
TPM4-201ENST00000300933 PNMA5Q96PV4 448 aa24.54■■□□□ 1.52
TPM4-201ENST00000300933 DDX25Q9UHL0 483 aaKnown RBP24.54■■□□□ 1.52
TPM4-201ENST00000300933 A0A1W2PRG0 241 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 SASH3O75995 380 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 CT47A1Q5JQC4 288 aaPredicted RBP24.53■■□□□ 1.52
TPM4-201ENST00000300933 PLCD3Q8N3E9 789 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 CALML4Q96GE6 196 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 TRIM47Q96LD4 638 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 P2RX7Q99572 595 aaKnown RBP24.53■■□□□ 1.52
TPM4-201ENST00000300933 PHLPP2Q6ZVD8 1323 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 MYO3BQ8WXR4 1341 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 ARHGAP6O43182 974 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 TADA3O75528 432 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 GYPCP04921 128 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 PBX1P40424 430 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 HAS1Q92839 578 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 BLOC1S4Q9NUP1 217 aa24.53■■□□□ 1.52
TPM4-201ENST00000300933 RHOBTB3O94955 611 aa24.52■■□□□ 1.52
TPM4-201ENST00000300933 ECE1P42892 770 aa24.52■■□□□ 1.52
TPM4-201ENST00000300933 MRPL12P52815 198 aaKnown RBP24.52■■□□□ 1.52
TPM4-201ENST00000300933 TATDN1Q6P1N9 297 aa24.52■■□□□ 1.52
TPM4-201ENST00000300933 GIMAP8Q8ND71 665 aaPredicted RBP24.52■■□□□ 1.52
TPM4-201ENST00000300933 SNX29Q8TEQ0 813 aa24.52■■□□□ 1.52
TPM4-201ENST00000300933 SIPA1L1O43166 1804 aa24.52■■□□□ 1.52
TPM4-201ENST00000300933 NDUFB10O96000 172 aa24.52■■□□□ 1.52
TPM4-201ENST00000300933 CLK2P49760 499 aaKnown RBP24.52■■□□□ 1.52
TPM4-201ENST00000300933 CTAGE1Q96RT6 745 aa24.52■■□□□ 1.52
TPM4-201ENST00000300933 IRX2Q9BZI1 471 aaPredicted RBP24.52■■□□□ 1.52
TPM4-201ENST00000300933 EXOC1Q9NV70 894 aa24.52■■□□□ 1.52
TPM4-201ENST00000300933 MYMKA6NI61 221 aa24.51■■□□□ 1.51
TPM4-201ENST00000300933 OAS2P29728 719 aaKnown RBP24.51■■□□□ 1.51
TPM4-201ENST00000300933 GYS2P54840 703 aa24.51■■□□□ 1.51
TPM4-201ENST00000300933 UBXN1Q04323 297 aa24.51■■□□□ 1.51
TPM4-201ENST00000300933 CDK5RAP3Q96JB5 506 aa24.51■■□□□ 1.51
TPM4-201ENST00000300933 SMCHD1A6NHR9 2005 aa24.51■■□□□ 1.51
TPM4-201ENST00000300933 hCG_1984214I3L0E3 225 aa24.51■■□□□ 1.51
TPM4-201ENST00000300933 PSMD14O00487 310 aa24.51■■□□□ 1.51
TPM4-201ENST00000300933 KCNJ6P48051 423 aa24.51■■□□□ 1.51
TPM4-201ENST00000300933 ZNF713Q8N859 430 aaPredicted RBP24.51■■□□□ 1.51
TPM4-201ENST00000300933 MRIQ9BWK5 157 aa24.51■■□□□ 1.51
TPM4-201ENST00000300933 NYAP2Q9P242 653 aa24.51■■□□□ 1.51
TPM4-201ENST00000300933 LIMA1Q9UHB6 759 aaKnown RBP24.51■■□□□ 1.51
TPM4-201ENST00000300933 STX10O60499 249 aa24.5■■□□□ 1.51
TPM4-201ENST00000300933 IDEP14735 1019 aa24.5■■□□□ 1.51
TPM4-201ENST00000300933 HDLBPQ00341 1268 aaKnown RBP24.5■■□□□ 1.51
TPM4-201ENST00000300933 ZYXQ15942 572 aaKnown RBP24.5■■□□□ 1.51
TPM4-201ENST00000300933 ANKRD40Q6AI12 368 aa24.5■■□□□ 1.51
TPM4-201ENST00000300933 RAD9BQ6WBX8 426 aa24.5■■□□□ 1.51
TPM4-201ENST00000300933 MIGA2Q7L4E1 593 aa24.5■■□□□ 1.51
TPM4-201ENST00000300933 LARGE2Q8N3Y3 721 aa24.5■■□□□ 1.51
TPM4-201ENST00000300933 GLIS3Q8NEA6 775 aa24.5■■□□□ 1.51
TPM4-201ENST00000300933 MTMR8Q96EF0 704 aa24.5■■□□□ 1.51
TPM4-201ENST00000300933 KCNB1Q14721 858 aa24.5■■□□□ 1.51
TPM4-201ENST00000300933 VEZTQ9HBM0 779 aa24.5■■□□□ 1.51
TPM4-201ENST00000300933 MYH7BA7E2Y1 1941 aa24.5■■□□□ 1.51
TPM4-201ENST00000300933 EFCAB8A8MWE9 144 aa24.49■■□□□ 1.51
TPM4-201ENST00000300933 PSMA7O14818 248 aa24.49■■□□□ 1.51
TPM4-201ENST00000300933 SSBP05455 408 aaKnown RBP eCLIP24.49■■□□□ 1.51
TPM4-201ENST00000300933 TMEM266Q2M3C6 531 aa24.49■■□□□ 1.51
TPM4-201ENST00000300933 TMEM179Q6ZVK1 233 aa24.49■■□□□ 1.51
TPM4-201ENST00000300933 MKL1Q969V6 931 aa24.49■■□□□ 1.51
TPM4-201ENST00000300933 TBC1D8O95759 1140 aa24.49■■□□□ 1.51
TPM4-201ENST00000300933 HOXA13P31271 388 aaPredicted RBP24.49■■□□□ 1.51
TPM4-201ENST00000300933 STAT3P40763 770 aa24.49■■□□□ 1.51
TPM4-201ENST00000300933 PDE4CQ08493 712 aa24.49■■□□□ 1.51
TPM4-201ENST00000300933 RBM26Q5T8P6 1007 aaKnown RBP24.49■■□□□ 1.51
TPM4-201ENST00000300933 CCDC84Q86UT8 332 aaPredicted RBP24.49■■□□□ 1.51
TPM4-201ENST00000300933 ACER1Q8TDN7 264 aa24.49■■□□□ 1.51
TPM4-201ENST00000300933 DUSP9Q99956 384 aaKnown RBP24.49■■□□□ 1.51
TPM4-201ENST00000300933 TUBB4AP04350 444 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 DPEP1P16444 411 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 KIAA1755Q5JYT7 1200 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 CC2D2BQ6DHV5 1058 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 TTI2Q6NXR4 508 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 SV2BQ7L1I2 683 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 CSGALNACT2Q8N6G5 542 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 KIAA0895Q8NCT3 520 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 MRPL44Q9H9J2 332 aaKnown RBP24.48■■□□□ 1.51
TPM4-201ENST00000300933 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.48■■□□□ 1.51
TPM4-201ENST00000300933 LZTFL1Q9NQ48 299 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 LRRC10BA6NIK2 292 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms