RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ADCY7P51828 1080 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 LRRC41Q15345 812 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 SV2BQ7L1I2 683 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 CAPZA3Q96KX2 299 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 MTMR9Q96QG7 549 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 NHEJ1Q9H9Q4 299 aaPredicted RBP14.39□□□□□ -0.11
HIF3A-204ENST00000300862 ABCB6Q9NP58 842 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 GAKO14976 1311 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 EPHB6O15197 1021 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 RAD21O60216 631 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 BRD3Q15059 726 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 KRT26Q7Z3Y9 468 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 FAM163AQ96GL9 167 aaPredicted RBP14.38□□□□□ -0.11
HIF3A-204ENST00000300862 MYH1P12882 1939 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 H3BQF6 201 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 PPP1R11O60927 126 aaPredicted RBP14.38□□□□□ -0.11
HIF3A-204ENST00000300862 AMPD3Q01432 767 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 DDR1Q08345 913 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 BEND6Q5SZJ8 279 aaPredicted RBP14.38□□□□□ -0.11
HIF3A-204ENST00000300862 CNNM4Q6P4Q7 775 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 CERKQ8TCT0 537 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 NOC3LQ8WTT2 800 aaKnown RBP14.38□□□□□ -0.11
HIF3A-204ENST00000300862 CDK5RAP3Q96JB5 506 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 HAUS4Q9H6D7 363 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 MAGEF1Q9HAY2 307 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 FAM207AQ9NSI2 230 aaPredicted RBP14.38□□□□□ -0.11
HIF3A-204ENST00000300862 MYO1AQ9UBC5 1043 aa14.38□□□□□ -0.11
HIF3A-204ENST00000300862 MACROD2A1Z1Q3 448 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 WHAMMP3Q1A5X7 153 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 CERS5Q8N5B7 392 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 SNX29Q8TEQ0 813 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 JAKMIP2Q96AA8 810 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 TRIM34Q9BYJ4 488 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 ZNHIT6Q9NWK9 470 aaKnown RBP14.37□□□□□ -0.11
HIF3A-204ENST00000300862 TAF1LQ8IZX4 1826 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 MPHOSPH10O00566 681 aaKnown RBP14.37□□□□□ -0.11
HIF3A-204ENST00000300862 ECM1Q16610 540 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 MEA1Q16626 185 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 DOK7Q18PE1 504 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 KCTD1Q719H9 257 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 CERS3Q8IU89 383 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 ADGRF4Q8IZF3 695 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 MSANTD4Q8NCY6 345 aa14.37□□□□□ -0.11
HIF3A-204ENST00000300862 LARP4BQ92615 738 aaKnown RBP14.37□□□□□ -0.11
HIF3A-204ENST00000300862 BBOX1O75936 387 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 NOVP48745 357 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 ZBED6P86452 979 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 GABPAQ06546 454 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 ZSCAN26Q16670 478 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 SMCR8Q8TEV9 937 aaPredicted RBP14.36□□□□□ -0.11
HIF3A-204ENST00000300862 TBC1D22AQ8WUA7 517 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 MMS19Q96T76 1030 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 TSPYL1Q9H0U9 437 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 JMJD4Q9H9V9 463 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 PDE11AQ9HCR9 933 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 RAB21Q9UL25 225 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 ESYT2A0FGR8 921 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 ZNF185O15231 689 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 TUBB2AQ13885 445 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 CCDC96Q2M329 555 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 SHROOM1Q2M3G4 852 aaPredicted RBP14.36□□□□□ -0.11
HIF3A-204ENST00000300862 CENPPQ6IPU0 288 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 TRAPPC11Q7Z392 1133 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 FAM114A1Q8IWE2 563 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 CCDC155Q8N6L0 562 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 TUBB2BQ9BVA1 445 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 USP40Q9NVE5 1235 aa14.36□□□□□ -0.11
HIF3A-204ENST00000300862 FAM196BA6NMK8 535 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 USP17L10C9JJH3 530 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 PSMD14O00487 310 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 MAP2K7O14733 419 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 ZNF263O14978 683 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 N4BP1O75113 896 aaKnown RBP14.35□□□□□ -0.11
HIF3A-204ENST00000300862 SSBP05455 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
HIF3A-204ENST00000300862 SMARCA1P28370 1054 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 CYLC1P35663 651 aaPredicted RBP14.35□□□□□ -0.11
HIF3A-204ENST00000300862 TMEM266Q2M3C6 531 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 FKBP15Q5T1M5 1219 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 DDX12PQ92771 950 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 ZFP91Q96JP5 570 aaPredicted RBP14.35□□□□□ -0.11
HIF3A-204ENST00000300862 HINFPQ9BQA5 517 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 MMRN2Q9H8L6 949 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 TBC1D7Q9P0N9 293 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 KRT83P78385 493 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 ASPRV1Q53RT3 343 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 UNC13DQ70J99 1090 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 C2CD5Q86YS7 1000 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 ZSCAN29Q8IWY8 852 aaPredicted RBP14.35□□□□□ -0.11
HIF3A-204ENST00000300862 GJD4Q96KN9 370 aaPredicted RBP14.35□□□□□ -0.11
HIF3A-204ENST00000300862 NUP58Q9BVL2 599 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 LCMT1Q9UIC8 334 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 SERPINB13Q9UIV8 391 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 SAR1BQ9Y6B6 198 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 NHSQ6T4R5 1651 aa14.35□□□□□ -0.11
HIF3A-204ENST00000300862 MARCH6O60337 910 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 ZMYND10O75800 440 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 IPO7O95373 1038 aaKnown RBP14.34□□□□□ -0.11
HIF3A-204ENST00000300862 TTLL1O95922 423 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms