RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 VCX3AQ9NNX9 186 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 USP27XA6NNY8 438 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 SETSIPP0DME0 302 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 CDC25AP30304 524 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 PDE6CP51160 858 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 KIF11P52732 1056 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 PDCLQ13371 301 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 ARHGEF18Q6ZSZ5 1173 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 SCYL3Q8IZE3 742 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 PCDHA13Q9Y5I0 950 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 POC1B-GALNT4F8VUJ3 575 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 HSPA6P17066 643 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 EIF3BP55884 814 aaKnown RBP13.98□□□□□ -0.17
CLPX-201ENST00000300107 TOB2Q14106 344 aaPredicted RBP13.98□□□□□ -0.17
CLPX-201ENST00000300107 TOGARAM2Q6ZUX3 1019 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.98□□□□□ -0.17
CLPX-201ENST00000300107 NEK9Q8TD19 979 aa13.98□□□□□ -0.17
CLPX-201ENST00000300107 N4BP2L2Q92802 583 aaPredicted RBP13.98□□□□□ -0.17
CLPX-201ENST00000300107 MYO1FO00160 1098 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 ARHGEF25Q86VW2 580 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 RNF168Q8IYW5 571 aaPredicted RBP13.97□□□□□ -0.17
CLPX-201ENST00000300107 FMR1NBQ8N0W7 255 aaPredicted RBP13.97□□□□□ -0.17
CLPX-201ENST00000300107 BPIFA3Q9BQP9 254 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 PFDN4Q9NQP4 134 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 C1orf112Q9NSG2 853 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 PCDHA4Q9UN74 947 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 KIAA1024Q9UPX6 916 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 PTPN22Q9Y2R2 807 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 IGSF1Q8N6C5 1336 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 ADD2P35612 726 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 BFSP1Q12934 665 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 TCP11X2Q5H9J9 407 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 CPXCR1Q8N123 301 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 SMCR8Q8TEV9 937 aaPredicted RBP13.97□□□□□ -0.17
CLPX-201ENST00000300107 COG7P83436 770 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 ARHGAP4P98171 946 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 HADHQ16836 314 aaKnown RBP13.97□□□□□ -0.17
CLPX-201ENST00000300107 FAM133BQ5BKY9 247 aaKnown RBP13.97□□□□□ -0.17
CLPX-201ENST00000300107 RASGRP4Q8TDF6 673 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 ASAP1Q9ULH1 1129 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 NFU1Q9UMS0 254 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 PTPN12Q05209 780 aaKnown RBP13.97□□□□□ -0.17
CLPX-201ENST00000300107 BSPRYQ5W0U4 402 aa13.97□□□□□ -0.17
CLPX-201ENST00000300107 PTPREP23469 700 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 KCNQ4P56696 695 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 GTF2IP78347 998 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 LMNB2Q03252 620 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 MB21D1Q8N884 522 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 FMO2Q99518 471 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 NDST4Q9H3R1 872 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 ZSWIM5Q9P217 1185 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 STK17AQ9UEE5 414 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 TMEM232C9JQI7 657 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 CYP2E1P05181 493 aaPredicted RBP13.96□□□□□ -0.17
CLPX-201ENST00000300107 LRRC41Q15345 812 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 RESP18Q5W5W9 173 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 NSMFQ6X4W1 530 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 CDAN1Q8IWY9 1227 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 CCDC127Q96BQ5 260 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 KIF2CQ99661 725 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 GREM2Q9H772 168 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 PPP1R9AQ9ULJ8 1098 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 PDE1CQ14123 709 aaPredicted RBP13.96□□□□□ -0.17
CLPX-201ENST00000300107 SLMAPQ14BN4 828 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 AOC3Q16853 763 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 GLE1Q53GS7 698 aaKnown RBP13.96□□□□□ -0.17
CLPX-201ENST00000300107 HSP90AA5PQ58FG0 334 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 MIER3Q7Z3K6 550 aa13.96□□□□□ -0.17
CLPX-201ENST00000300107 GPHNQ9NQX3 736 aaPredicted RBP13.96□□□□□ -0.17
CLPX-201ENST00000300107 RASGRF2O14827 1237 aa13.96□□□□□ -0.18
CLPX-201ENST00000300107 AFPP02771 609 aaKnown RBP13.96□□□□□ -0.18
CLPX-201ENST00000300107 CUL1Q13616 776 aa13.96□□□□□ -0.18
CLPX-201ENST00000300107 C10orf76Q5T2E6 689 aa13.96□□□□□ -0.18
CLPX-201ENST00000300107 RNF34Q969K3 372 aa13.96□□□□□ -0.18
CLPX-201ENST00000300107 PUS7LQ9H0K6 701 aaKnown RBP13.96□□□□□ -0.18
CLPX-201ENST00000300107 RABGAP1Q9Y3P9 1069 aa13.96□□□□□ -0.18
CLPX-201ENST00000300107 SERPING1P05155 500 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 KRT19P08727 400 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 NSFP46459 744 aaKnown RBP13.95□□□□□ -0.18
CLPX-201ENST00000300107 SLCO1A2P46721 670 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 TAF11Q15544 211 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 FAM133AQ8N9E0 248 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 ST7Q9NRC1 585 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 FRMPD2Q68DX3 1309 aaPredicted RBP13.95□□□□□ -0.18
CLPX-201ENST00000300107 MAGI3Q5TCQ9 1506 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 ANO9A1A5B4 782 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 K7ENM7 598 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 ZWINTO95229 277 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 SLC12A2P55011 1212 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 YWHAEP62258 255 aaKnown RBP13.95□□□□□ -0.18
CLPX-201ENST00000300107 CYP4A11Q02928 519 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 ARMCX5Q6P1M9 558 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 PDCD7Q8N8D1 485 aaKnown RBP13.95□□□□□ -0.18
CLPX-201ENST00000300107 TXLNGQ9NUQ3 528 aa13.95□□□□□ -0.18
CLPX-201ENST00000300107 SART1O43290 800 aaKnown RBP13.94□□□□□ -0.18
CLPX-201ENST00000300107 ECEL1O95672 775 aa13.94□□□□□ -0.18
CLPX-201ENST00000300107 GOLPH3LQ9H4A5 285 aa13.94□□□□□ -0.18
CLPX-201ENST00000300107 ATG3Q9NT62 314 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms