RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.88■□□□□ 0.29
FNDC1-201ENST00000297267 MLH3Q9UHC1 1453 aa16.88■□□□□ 0.29
FNDC1-201ENST00000297267 SLFN13Q68D06 897 aa16.88■□□□□ 0.29
FNDC1-201ENST00000297267 ZWILCHQ9H900 591 aa16.88■□□□□ 0.29
FNDC1-201ENST00000297267 PCDHA1Q9Y5I3 950 aa16.88■□□□□ 0.29
FNDC1-201ENST00000297267 DNM2P50570 870 aa16.88■□□□□ 0.29
FNDC1-201ENST00000297267 HABP4Q5JVS0 413 aaKnown RBP16.88■□□□□ 0.29
FNDC1-201ENST00000297267 ODR4Q5SWX8 454 aa16.88■□□□□ 0.29
FNDC1-201ENST00000297267 NUF2Q9BZD4 464 aa16.88■□□□□ 0.29
FNDC1-201ENST00000297267 MX2P20592 715 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 DMP1Q13316 513 aaPredicted RBP16.87■□□□□ 0.29
FNDC1-201ENST00000297267 ZSWIM5Q9P217 1185 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 RABGAP1Q9Y3P9 1069 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 USP27XA6NNY8 438 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 RFC1P35251 1148 aaPredicted RBP16.87■□□□□ 0.29
FNDC1-201ENST00000297267 PIGOQ8TEQ8 1089 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 NAP1L4Q99733 375 aaKnown RBP16.87■□□□□ 0.29
FNDC1-201ENST00000297267 PLCB1Q9NQ66 1216 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 ARMCX3Q9UH62 379 aaPredicted RBP16.87■□□□□ 0.29
FNDC1-201ENST00000297267 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 RGS12O14924 1447 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 PIK3R2O00459 728 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 GSTA1P08263 222 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 GSTA2P09210 222 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 CMA1P23946 247 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 SLC12A2P55011 1212 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 EXOC3L4Q17RC7 722 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 ZNF394Q53GI3 561 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 ANKRD20A3Q5VUR7 823 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 RFX8Q6ZV50 586 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 C7orf31Q8N865 590 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 ADAM33Q9BZ11 813 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 KITP10721 976 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 ECE1P42892 770 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 RUFY4Q6ZNE9 571 aa16.87■□□□□ 0.29
FNDC1-201ENST00000297267 NXF1Q9UBU9 619 aaKnown RBP16.87■□□□□ 0.29
FNDC1-201ENST00000297267 FMNL1O95466 1100 aaPredicted RBP16.86■□□□□ 0.29
FNDC1-201ENST00000297267 LRCH2Q5VUJ6 765 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 EXT2Q93063 718 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 ZNF804BA4D1E1 1349 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 ADAMTS12P58397 1594 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 PPEF1O14829 653 aaPredicted RBP16.86■□□□□ 0.29
FNDC1-201ENST00000297267 ABCB5Q2M3G0 1257 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 NHEJ1Q9H9Q4 299 aaPredicted RBP16.86■□□□□ 0.29
FNDC1-201ENST00000297267 PACSIN2Q9UNF0 486 aaPredicted RBP16.86■□□□□ 0.29
FNDC1-201ENST00000297267 NEDD4P46934 1319 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 TEKT3Q9BXF9 490 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 KIF9Q9HAQ2 790 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 MKRN1Q9UHC7 482 aaKnown RBP16.86■□□□□ 0.29
FNDC1-201ENST00000297267 GIPC1O14908 333 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 RNF40O75150 1001 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 NR2F2P24468 414 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 TRIM58Q8NG06 486 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 SPDL1Q96EA4 605 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 RPS6KA2Q15349 733 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 SPATA1Q5VX52 437 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 RAB17Q9H0T7 212 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 PARP2Q9UGN5 583 aa16.86■□□□□ 0.29
FNDC1-201ENST00000297267 NCK2O43639 380 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 TUBB4AP04350 444 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 MYOM2P54296 1465 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 BFSP1Q12934 665 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 HLFQ16534 295 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 ALKBH8Q96BT7 664 aaKnown RBP16.85■□□□□ 0.29
FNDC1-201ENST00000297267 C1orf112Q9NSG2 853 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 TMEM260Q9NX78 707 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 BNIP3LO60238 219 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 ANO4Q32M45 955 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 BANK1Q8NDB2 785 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 CSRNP1Q96S65 589 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 ABCA5Q8WWZ7 1642 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 CYB5R4Q7L1T6 521 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 MYLK4Q86YV6 388 aaPredicted RBP16.85■□□□□ 0.29
FNDC1-201ENST00000297267 OXER1Q8TDS5 423 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 PCDHA4Q9UN74 947 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 EEF1GP26641 437 aaKnown RBP16.85■□□□□ 0.29
FNDC1-201ENST00000297267 MTERF2Q49AM1 385 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 HIPK4Q8NE63 616 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 TCP11Q8WWU5 503 aa16.85■□□□□ 0.29
FNDC1-201ENST00000297267 SRGAP2CP0DJJ0 459 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 MAGI3Q5TCQ9 1506 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 E2F4Q16254 413 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 KMT5BQ4FZB7 885 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 RYBPQ8N488 228 aaPredicted RBP16.84■□□□□ 0.29
FNDC1-201ENST00000297267 CFAP61Q8NHU2 1237 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 CCDC195A0A1B0GUA6 201 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 M0QZ92 97 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
FNDC1-201ENST00000297267 PLCG1P19174 1290 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 POTEDQ86YR6 584 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 SH3RF3Q8TEJ3 882 aaPredicted RBP16.84■□□□□ 0.29
FNDC1-201ENST00000297267 MAGOHBQ96A72 148 aaKnown RBP16.84■□□□□ 0.29
FNDC1-201ENST00000297267 CHMP6Q96FZ7 201 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 SLAIN2Q9P270 581 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 ZCWPW1Q9H0M4 648 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 KDM3AQ9Y4C1 1321 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 WHAMMP3Q1A5X7 153 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 DACT3Q96B18 629 aaPredicted RBP16.84■□□□□ 0.29
FNDC1-201ENST00000297267 GCNT4Q9P109 453 aa16.84■□□□□ 0.29
FNDC1-201ENST00000297267 ATF5Q9Y2D1 282 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms