RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 YDJCA8MPS7 323 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 LGALS16A8MUM7 142 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 CCP110O43303 1012 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 SLC1A4P43007 532 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 CNGA4Q8IV77 575 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 ZNF397Q8NF99 534 aaPredicted RBP13.18□□□□□ -0.3
RHO-201ENST00000296271 CALML4Q96GE6 196 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 BCAS3Q9H6U6 928 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 KANSL2Q9H9L4 492 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 SWAP70Q9UH65 585 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 SUGT1Q9Y2Z0 365 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 PCDHA1Q9Y5I3 950 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 E9PMD0 336 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 EPHB6O15197 1021 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 NT5C2P49902 561 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 CLCN6P51797 869 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 MIIPQ5JXC2 388 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 SLFN13Q68D06 897 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 PODNQ7Z5L7 613 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 SLC35F6Q8N357 371 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 MNS1Q8NEH6 495 aa13.18□□□□□ -0.3
RHO-201ENST00000296271 LARP4BQ92615 738 aaKnown RBP13.18□□□□□ -0.3
RHO-201ENST00000296271 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
RHO-201ENST00000296271 ITIH6Q6UXX5 1313 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 H0YIN7 160 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 PLSCR1O15162 318 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 C21orf2O43822 256 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 ARHGAP25P42331 645 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 CDC37Q16543 378 aaPredicted RBP13.17□□□□□ -0.3
RHO-201ENST00000296271 TEX35Q5T0J7 233 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
RHO-201ENST00000296271 SV2BQ7L1I2 683 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 DDX12PQ92771 950 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 CUL5Q93034 780 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 TMX4Q9H1E5 349 aaPredicted RBP13.17□□□□□ -0.3
RHO-201ENST00000296271 MRFAP1Q9Y605 127 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 QSER1Q2KHR3 1735 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 GH2P01242 217 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 CCNE1P24864 410 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 HOXA13P31271 388 aaPredicted RBP13.17□□□□□ -0.3
RHO-201ENST00000296271 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
RHO-201ENST00000296271 SPAG1Q07617 926 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 KIAA1755Q5JYT7 1200 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 CDK5RAP3Q96JB5 506 aa13.17□□□□□ -0.3
RHO-201ENST00000296271 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 POTECB2RU33 542 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 TCP10L2B9ZVM9 353 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 F5H6K3 240 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
RHO-201ENST00000296271 ECE1P42892 770 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 MTIF2P46199 727 aaKnown RBP13.16□□□□□ -0.3
RHO-201ENST00000296271 PPP2R3AQ06190 1150 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 KLRC3Q07444 240 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 IKQ13123 557 aaPredicted RBP13.16□□□□□ -0.3
RHO-201ENST00000296271 STIM1Q13586 685 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 ANKRD20A12PQ8NF67 263 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 CYP2W1Q8TAV3 490 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 UBXN4Q92575 508 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 RAD54LQ92698 747 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 DDX41Q9UJV9 622 aaKnown RBP13.16□□□□□ -0.3
RHO-201ENST00000296271 RCCD1A6NED2 376 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 MARCH6O60337 910 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 H2AFXP16104 143 aaPredicted RBP13.16□□□□□ -0.3
RHO-201ENST00000296271 ZSCAN20P17040 1043 aaPredicted RBP13.16□□□□□ -0.3
RHO-201ENST00000296271 ICA1Q05084 483 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 TBC1D8BQ0IIM8 1120 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 STRIP1Q5VSL9 837 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 CCDC84Q86UT8 332 aaPredicted RBP13.16□□□□□ -0.3
RHO-201ENST00000296271 MTMR8Q96EF0 704 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 THAP9Q9H5L6 903 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 PI4KBQ9UBF8 816 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
RHO-201ENST00000296271 DUSP10Q9Y6W6 482 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 ARFGEF1Q9Y6D6 1849 aa13.16□□□□□ -0.3
RHO-201ENST00000296271 MEIS1O00470 390 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 MEIS2O14770 477 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 NDUFB10O96000 172 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 APBA1Q02410 837 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 EZH2Q15910 746 aaKnown RBP13.15□□□□□ -0.3
RHO-201ENST00000296271 TBC1D5Q92609 795 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 DHTKD1Q96HY7 919 aaPredicted RBP13.15□□□□□ -0.3
RHO-201ENST00000296271 PCMTD1Q96MG8 357 aaPredicted RBP13.15□□□□□ -0.3
RHO-201ENST00000296271 MAGEC2Q9UBF1 373 aaPredicted RBP13.15□□□□□ -0.3
RHO-201ENST00000296271 GUCA1BQ9UMX6 200 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 PCDHA12Q9UN75 941 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 KIAA1024Q9UPX6 916 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 ATF5Q9Y2D1 282 aaPredicted RBP13.15□□□□□ -0.3
RHO-201ENST00000296271 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
RHO-201ENST00000296271 ENC1O14682 589 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 RAD17O75943 681 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 FECHP22830 423 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 EEF1GP26641 437 aaKnown RBP13.15□□□□□ -0.3
RHO-201ENST00000296271 HERVK_113P62684 666 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 CYP27A1Q02318 531 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
RHO-201ENST00000296271 GPATCH4Q5T3I0 446 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms